Job Description P0A9B2 Confidence 96.50% Date Thu Jan 5 11:09:48 GMT 2012 Rank 236 Aligned Residues 143 % Identity 16% Template c1sevA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase, glyoxysomal precursor; PDBTitle: mature and translocatable forms of glyoxysomal malate2 dehydrogenase have different activities and stabilities3 but similar crystal structures Resolution 2.55 Å

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		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		I	K	V	G	I	N	G	.	F	G	R	I	G	R	I	V	F	R	A	A	Q	K	R	S	D	I	E	I	V	A	I	N	D	L	L	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	K	D	G	H	L	I	V	N	G	K	K	I	R	V	T	A	E	R	D	P	A
Query Conservation									.
Alig confidence									.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	V	A	I	L	G	A	A	G	G	I	G	Q	P	L	A	M	L	M	K	M	N	P	L	V	S	V	L	H	L	Y	D	V	V	N	A	P	G	V	T	A	D	I	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	T	G	A	V	V	R	G	F	L	G	Q	Q
Template Known Secondary structure								T	T	T	S	T	T										T		T	T									S	S	S										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S								S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																					.	.	.	.	.	.	.	.	.	100	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																						.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																						.
Query Sequence		N	L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	T	A	R	K	H	I	T	A	G	.	.	A	K	K	V	V	M	T	G	P	S	K	D	N	T	P	M	F	V	K	G	A	.	N	F	D	K	Y	A	G	Q
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																						.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																						.
Template Conservation
Template Sequence		Q	L	E	A	A	L	T	G	M	D	L	I	I	V	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	K	I	N	A	G	I	V	K	T	L	C	E	G	I	A	K	C	C	P	R	A	I	V	N	L	I	S	N	P	V	N	S	T	V	P	I	A	A	E	V	F	K	K	A	G	T	Y	D	P	K
Template Known Secondary structure								T	T		S												T	T			S	S	S																					T	T	S							S															T	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	S	N	A	S	C	T	T	N	C	L	A	P	L	A	K	V	I	N	D	N	F	G	I
Query Conservation
Alig confidence						.	.		.
Template Conservation						.	.		.
Template Sequence		R	L	L	G	.	.	V	.	T	M	L	D	V	V	R	A	N	T	F	V	A	E	V	L	G	L
Template Known Secondary structure		S				.	.		.																T	T
Template Predicted Secondary structure						.	.		.
Template SS confidence
		185	.	.	.			.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions