Job Description P0A9B2 Confidence 100.00% Date Thu Jan 5 11:09:48 GMT 2012 Rank 12 Aligned Residues 328 % Identity 48% Template c1rm4O_ PDB info PDB header:oxidoreductase Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase a; PDBTitle: crystal structure of recombinant photosynthetic glyceraldehyde-3-2 phosphate dehydrogenase a4 isoform, complexed with nadp Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																																			.
Query SS confidence																										.	.																																			.
Query Sequence		I	K	V	G	I	N	G	F	G	R	I	G	R	I	V	F	R	A	A	Q	K	R	S	D	.	.	I	E	I	V	A	I	N	D	L	L	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	.	K	D	G	H	L	I	V	N	G	K	K	I	R	V	T	A	E	R	D
Query Conservation																										.	.																																			.
Alig confidence																										.	.																																			.
Template Conservation
Template Sequence		L	K	V	A	I	N	G	F	G	R	I	G	R	N	F	L	R	C	W	H	G	R	K	D	S	P	L	D	V	V	V	I	N	D	T	G	G	V	K	Q	A	S	H	L	L	K	Y	D	S	I	L	G	T	F	D	A	D	V	K	T	A	G	D	S	A	I	S	V	D	G	K	V	I	K	V	V	S	D	R	N
Template Known Secondary structure										S												T		S	S		S									T	T													T	T	T		S		S	S						T	T	S					T	T									S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		P	A	N	L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	D	E	T	A	R	K	H	I	T	A	G	A	K	K	V	V	M	T	G	P	S	K	D	N	T	P	M	F	V	K	G	A	N	F	D	K	Y	A	G	Q	.	D	I	V	S	N	A	S	C	T	T	N	C	L	A	P	L
Query Conservation																																																																	.
Alig confidence																																																																	.
Template Conservation
Template Sequence		P	V	N	L	P	W	G	D	M	G	I	D	L	V	I	E	G	T	G	V	F	V	D	R	D	G	A	G	K	H	L	Q	A	G	A	K	K	V	L	I	T	A	P	G	K	G	D	I	P	T	Y	V	V	G	V	N	E	E	G	Y	T	H	A	D	T	I	I	S	N	A	S	C	T	T	N	C	L	A	P	F
Template Known Secondary structure		G	G	G	S						T								S	S	S			B										T	T		S					S	S			B	S	S			B			T	T	T	T	G	G	G			T	T		S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	I	N	D	N	F	G	I	I	E	G	L	M	T	T	V	H	A	T	T	A	T	Q	K	T	V	D	G	P	S	H	K	D	W	R	G	G	R	G	A	S	Q	N	I	I	P	S	S	T	G	A	A	K	A	V	G	K	V	L	P	E	L	N	G	K	L	T	G	M	A	F	R	V	P	T	P	N	V
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		V	K	V	L	D	Q	K	F	G	I	I	K	G	T	M	T	T	T	H	S	Y	T	G	D	Q	R	L	L	D	A	S	.	H	R	D	L	R	R	A	R	A	A	C	L	N	I	V	P	T	S	T	G	A	A	K	A	V	A	L	V	L	P	N	L	K	G	K	L	N	G	I	A	L	R	V	P	T	P	N	V
Template Known Secondary structure																								T	T	S		S	S	S			.		S	S	T	T	T	T	S		T	T	T																		G	G	G	T	T	T									S		S	S
Template Predicted Secondary structure																																	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	V	D	L	T	V	R	L	E	K	A	A	T	Y	E	Q	I	K	A	A	V	K	A	A	A	E	G	E	M	K	G	V	L	G	Y	T	E	D	D	V	V	S	T	D	F	N	G	E	V	C	T	S	V	F	D	A	K	A	G	I	A	L	N	D	N	F	V	K	L	V	S	W	Y	D	N	E	T	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	V	D	L	V	V	Q	V	S	K	K	T	F	A	E	E	V	N	A	A	F	R	E	S	A	D	N	E	L	K	G	I	L	S	V	C	D	E	P	L	V	S	I	D	F	R	C	T	D	V	S	S	T	I	D	S	S	L	T	M	V	M	G	D	D	M	V	K	V	I	A	W	Y	D	N	E	W	G	Y
Template Known Secondary structure											S	S																T	T	T	T	T	T	T						S				G	G	G	G	T	T			S	S					G	G	G					T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	K	V	L	D	L	I	A	H	I	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	R	V	V	D	L	A	D	I	V	A	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions