Job Description P0A9B2 Confidence 100.00% Date Thu Jan 5 11:09:48 GMT 2012 Rank 23 Aligned Residues 305 % Identity 20% Template c1cf2Q_ PDB info PDB header:oxidoreductase Chain: Q: PDB Molecule:protein (glyceraldehyde-3-phosphate PDBTitle: three-dimensional structure of d-glyceraldehyde-3-phosphate2 dehydrogenase from the hyperthermophilic archaeon3 methanothermus fervidus Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																									.
Query SS confidence																																					.																									.
Query Sequence		T	I	K	V	G	I	N	G	F	G	R	I	G	R	I	V	F	R	A	A	Q	K	R	S	D	I	E	I	V	A	I	N	D	L	L	.	D	A	D	Y	M	A	Y	M	L	K	Y	D	S	T	H	G	R	F	D	G	T	V	E	V	.	K	D	G	H	L	I	V	N	G	K	K	I	R	V	T	A	E	R	D
Query Conservation																																					.																									.
Alig confidence																																					.																									.												.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		M	K	A	V	A	I	N	G	Y	G	T	V	G	K	R	V	A	D	A	I	A	Q	Q	D	D	M	K	V	I	G	V	S	K	T	R	P	D	F	E	A	R	M	A	L	K	K	G	Y	D	L	Y	V	A	I	P	E	R	V	K	L	F	E	K	A	G	I	E	V	A	G	T	V	.	.	.	.	.	.	.	.
Template Known Secondary structure											S	T	T											S	T	T									S	S		S									T	T						S	S	G	G	G							T	T								.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		P	A	N	L	K	W	D	E	V	G	V	D	V	V	A	E	A	T	G	L	F	L	T	D	E	T	A	R	K	H	I	T	A	G	A	K	K	V	V	M	T	G	P	S	K	D	.	N	T	P	M	F	V	K	G	A	N	F	D	K	Y	A	G	Q	D	I	V	S	N	A	S	C	T	T	N	C	L	A	P	L
Query Conservation																																																.
Alig confidence		.	.	.	.																																											.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	D	M	L	D	E	A	D	I	V	I	D	C	T	P	E	G	I	G	A	K	N	L	K	M	Y	K	E	K	G	I	K	A	I	F	Q	G	G	E	K	H	E	D	I	G	L	S	F	N	S	L	S	N	Y	E	E	S	Y	G	K	D	Y	T	R	V	V	S	C	N	T	T	G	L	C	R	T
Template Known Secondary structure		.	.	.	.						T		S								T	T													T							T	T	S						S									G	G	G	G	T	T		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	I	N	D	N	F	G	I	I	E	G	L	M	T	T	V	H	A	T	T	A	T	Q	K	T	V	D	G	P	S	H	K	D	W	R	G	G	R	G	A	S	Q	N	I	I	P	S	S	T	G	A	A	K	A	V	G	K	V	L	P	E	L	N	G	K	L	T	G	M	A	F	R	V	P	T	P	N	V
Query Conservation
Alig confidence																												.	.	.	.	.																							.	.	.	.	.
Template Conservation																												.	.	.	.	.																							.	.	.	.	.
Template Sequence		L	K	P	L	H	D	S	F	G	I	K	K	V	R	A	V	I	V	R	R	G	A	D	P	A	Q	.	.	.	.	.	V	S	K	G	P	I	N	A	I	I	P	N	P	P	K	L	P	S	H	H	G	P	.	.	.	.	.	D	V	K	T	V	L	D	I	N	I	D	T	M	A	V	I	V	P	T	T	L	M
Template Known Secondary structure																						S	S		T	T		.	.	.	.	.	T	T				S	S					S	S	S	S	S	S		T				.	.	.	.	.				T	T	S		S										S		S	S
Template Predicted Secondary structure																												.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																.	.	.	.																												.	.	.
Query SS confidence																																.	.	.	.																												.	.	.
Query Sequence		S	V	V	D	L	T	V	R	L	E	K	A	A	T	Y	E	Q	I	K	A	A	V	K	A	A	A	E	G	E	M	.	.	.	.	K	G	V	L	G	Y	T	E	D	D	V	V	S	T	D	F	N	G	E	V	C	T	S	V	F	D	A	.	.	.	K	A	G	I	A	L	N	D	N	F	V	K	L	V	S	W
Query Conservation																																.	.	.	.																												.	.	.
Alig confidence																																.	.	.	.																	.											.	.	.
Template Conservation																																																				.
Template Sequence		H	Q	H	N	V	M	V	E	V	E	E	T	P	T	V	D	D	I	I	D	V	F	E	D	T	P	R	V	I	L	I	S	A	E	D	G	L	T	S	T	A	E	I	M	E	Y	A	K	E	L	.	G	R	S	R	N	D	L	F	E	I	P	V	W	R	E	S	I	T	V	V	D	N	E	I	Y	Y	M	Q	A
Template Known Secondary structure											S	S														S	T	T						G	G	G	T			S												.	T		G	G	G				S					G	G	G					T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	N	E	T	G	Y	S	N	K	V	L	D	L	I	A	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	Q	E	S	D	I	V	P	E	N	V	D	A	V	R	A	I
Template Known Secondary structure				T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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