Return to main results Retrieve Phyre Job Id

Job DescriptionA5A630
Confidence35.46%DateThu Jan 5 10:55:32 GMT 2012
Rank1Aligned Residues32
% Identity19%Templatec3kdpD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:sodium/potassium-transporting atpase subunit beta-1; PDBTitle: crystal structure of the sodium-potassium pump
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60....... ..70.........80.........90.
Predicted Secondary structure 



....


Query SS confidence 







. . . .























Query Sequence  VIQRANIN. . . . LAFVGIIYTALFALYAMLFWLAFF
Query Conservation 
  
 
  ....
   
  
 

 
  
   


 
Alig confidence 







....























Template Conservation   



  

  
 


 


  

  

  
 
   
Template Sequence  FLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLL
Template Known Secondary structure  SS
SS
S

GGGS
Template Predicted Secondary structure 


Template SS confidence 



































   24.....30.........40.........50.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions