Job Description A5A630 Confidence 1.87% Date Thu Jan 5 10:55:32 GMT 2012 Rank 47 Aligned Residues 89 % Identity 12% Template c3eamB_ PDB info PDB header:membrane protein, transport protein Chain: B: PDB Molecule:glr4197 protein; PDBTitle: an open-pore structure of a bacterial pentameric ligand-2 gated ion channel Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.
Predicted Secondary structure																														.	.	.	.																																								.	.	.	.	.
Query SS confidence																														.	.	.	.																																								.	.	.	.	.
Query Sequence		M	P	T	V	L	S	R	M	A	M	Q	L	K	K	T	A	W	I	I	P	V	F	M	V	S	G	C	S	.	.	.	.	L	S	P	A	I	P	V	I	G	A	Y	Y	P	S	W	F	F	C	A	I	A	S	L	I	L	T	L	I	T	R	R	V	I	Q	R	A	N	I	N	.	.	.	.	.	L	A	F	V
Query Conservation																														.	.	.	.																																								.	.	.	.	.
Alig confidence											.	.																		.	.	.	.																																								.	.	.	.	.
Template Conservation											.	.
Template Sequence		S	T	S	Y	E	A	N	V	T	.	.	L	V	V	S	T	L	I	A	H	I	A	F	N	I	L	V	E	T	N	L	P	K	T	P	Y	M	T	Y	T	G	A	I	I	F	M	I	Y	L	F	Y	F	V	A	V	I	E	V	T	V	Q	H	Y	L	K	V	E	S	Q	P	A	R	A	A	S	I	T	R	A	S
Template Known Secondary structure											.	.																			T	S				S	S																															T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	Y	T	A	L	F	A	L	Y	A	M	L	F	W	L	A	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	A	F	P	V	V	F	L	L	A	N	I	I	L	A	F	L	F	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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