Job Description P0AGH3 Confidence 99.74% Date Wed Jan 25 15:20:34 GMT 2012 Rank 6 Aligned Residues 293 % Identity 10% Template c3fh6F_ PDB info PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli Resolution 4.50 Å

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		1	.	.	.	.	.	.	.							.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		M	I	I	F	T	L	R	R	.	.	.	.	.	.	I	L	L	L	I	V	T	L	F	L	L	T	F	V	G	F	S	L	S	Y	F	T	P	H	A	P	L	Q	G	A	S	L	W	N	A	W	V	F	W	F	N	G	L	I	H	W	D	F	G	V	S	S	I	N	G	Q	P	I	A	E	Q	L	K	E	V	F
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	T	L	I	L	S	S	A	G	L	Y	I	Y	V	Y	P	G	M	A	G	M	G	L	F	V	L	F	P	L	V	C	T	I	A	I	A	F	T	N	Y	S	S	T	N	Q	L	T	F	E	R	A	Q	E	V	L	L	D	R	S	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	F	L	A	I	F
Template Known Secondary structure																											T									T	T	S	S	S	S		S	S	S		S	S											T				T	T					S		S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	T	M	E	L	C	I	L	A	F	G	F	A	L	I	V	G	I	P	V	G	M	I	A	G	I	T	R	H	K	W	Q	D	N	L	I	N	A	I	A	L	L	G	F	S	I	P	V	F	W	L	A	L	L	L	T	L	F	C	S	L	T	L	G	W	L	P	V	S	G	R	F	D	L	L	Y	E	V	K
Query Conservation
Alig confidence																														.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	.	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																											T		S	.	S	S	S															S		S											S		S	S	S	S					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	T	G	F	A	L	I	D	A	W	L	S	D	S	P	W	R	D	E	M	I	M	S	A	I	R	H	M	I	L	P	V	I	T	L	S	V	A	P	T	T	E	V	I	R	L	M	R	I	S	T	I	E	V	Y	D	Q	N	Y	V	K	A	A	A	T	R	G	L	S	R	F	T	I	L	R	R	H	V	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																															.
Template Conservation		.	.	.	.	.	.	.	.	.																																															.
Template Sequence		.	.	.	.	.	.	.	.	.	M	L	S	A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	.	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.						S	S					S	S	S	S																															S	.															S							T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																															.
Template SS confidence
											350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.															.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	N	A	L	P	P	V	I	P	R	L	G	L	Q	F	S	T	M	L	T	L	A	M	I	T	E	M	V	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	P	G	L	G	R	W	L	I	N	A	I	R	Q	Q	D	Y	A	A	I	S	A	G	V	M	V	C	G	S	L	V	I	I	V	N	V
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G
Template Known Secondary structure		T	T	T																	T										S	S		S			S	S		S	S	S			S	S										T	T		S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	D	I	L	G	A	M	A	N	P	L	K	H	K	E	W
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		A	L	A	I	V	N	L	K	A	.	.	T	R	M	K	F	D
Template Known Secondary structure											.	.	S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		500	.	.	.	.	.	.	.	.			.	510	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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