Job Description P05637 Confidence 86.71% Date Thu Jan 5 10:58:47 GMT 2012 Rank 65 Aligned Residues 67 % Identity 13% Template c3floG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna polymerase alpha subunit b; PDBTitle: crystal structure of the carboxyl-terminal domain of yeast2 dna polymerase alpha in complex with its b subunit Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																								.	.	.	50	.	.
Predicted Secondary structure														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	T	Y	L	I	G	D	V	H	G	C	.	.	.	.	.	Y	D	E	L	I	A	L	L	H	K	V	E	F	T	P	G	K	D	T	L	W	L	T	G	D	L	V	A	R	G	P	G	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	L	R	Y	V
Query Conservation														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	V	I	V	T	C	G	P	Y	F	A	N	D	N	F	S	L	E	L	L	Q	E	F	I	D	S	I	N	N	E	V	K	P	H	V	L	I	M	F	G	P	F	I	D	I	T	H	P	L	I	A	S	G	K	L	P	N	F	P	Q	F	K	T	Q	P	K	T	L	D	E	L	F	L	K	L	F	T	P	I
Template Known Secondary structure									S			S		T	T																	T	T			S						S		S	S	B	T	T	S						T						T	T		S	S			S	S									T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		53	.	.				.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		K	S	L	.	.	.	G	D	S	V	R	L	V	L	G	N	H	D
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		L	K	T	I	S	P	H	I	Q	T	V	L	I	P	S	T	K	D
Template Known Secondary structure			T	T	S		T	T	S								T	T	B
Template Predicted Secondary structure
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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