Job Description P05637 Confidence 98.78% Date Thu Jan 5 10:58:47 GMT 2012 Rank 30 Aligned Residues 66 % Identity 29% Template c3av0A_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11-rad50 bound to atp s Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10														.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Query Sequence		M	A	T	Y	L	I	G	D	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	Y	D	E	L	I	A	L	L	H	K	V	E	F	T	P	G	K	D	T	L	W	L	T	G	D	L	V	A	R	G	P	G	S	L	D	V	L	R	Y	V	K	S	L	.	.	.	.	.	.	.	G	D	S	V	R
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		M	M	F	V	H	I	A	D	N	H	L	G	Y	R	Q	Y	N	L	D	D	R	E	K	D	I	Y	D	S	F	K	L	C	I	K	K	I	L	E	I	.	K	P	D	V	V	L	H	S	G	D	L	F	N	D	L	R	P	P	V	K	A	L	R	I	A	M	Q	A	F	K	K	L	H	E	N	N	I	K	V	Y
Template Known Secondary structure												B	T			G	G	G																					T	T	.			S						S		S	B	S	S	S	S																			T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	G	N	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	A	G	N	H	E
Template Known Secondary structure						G	G	G
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions