Job Description P05637 Confidence 99.48% Date Thu Jan 5 10:58:47 GMT 2012 Rank 23 Aligned Residues 154 % Identity 21% Template c1s3mA_ PDB info PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	T	Y	L	I	G	D	V	H	G	C	Y	D	E	L	I	A	L	L	H	K	V	E	F	T	P	G	K	D	T	L	W	L	T	G	D	L	V	A	R	G	P	G	S	L	D	V	L	R	Y	V	K	S	L	G	D	S	V	R	L	V	L	G	N	H	D	L	H	L	L	A	V	F	A	G	I	S	R	N
Query Conservation
Alig confidence																												.															.	.	.	.	.
Template Conservation																												.															.	.	.	.	.
Template Sequence		M	K	I	G	I	M	S	D	T	H	D	H	L	P	N	I	R	K	A	I	E	I	F	N	D	E	.	N	V	E	T	V	I	H	C	G	D	F	V	S	L	.	.	.	.	.	F	V	I	K	E	F	E	N	L	N	A	N	I	I	A	T	Y	G	N	N	D	G	E	R	C	K	L	K	E	W	L	K	D	I
Template Known Secondary structure											T	T														T	S	.			S						S				S	T	.	.	.	.	.						G	G	G			S								T	T
Template Predicted Secondary structure																												.															.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	K	D	R	L	T	P	L	L	E	A	P	D	A	D	E	L	L	N	W	L	R	R	Q	P	L	L	Q	I	D	E	E	K	K	L	V	M	A	H	A	G	I	T	P	Q	W	D	L	Q	T	A	K	E	C	A	R	D	V	E	A	V	L	S	S	D	S	Y	P	F	F	L	D	A	M	Y	G	D	M	P
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	I	D	D	F	I	S	V	E	I	D	D	L	K	F	F	I	T	H	G	H	H	Q	S	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S							T	T								T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.																		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	W	S	P	E	L	R	G	L	G	R	L	R	F	I	T	N	A	F	T	R	M	R	F	C	F	P	N	G	Q	L	D	M	Y	S	K	E	S	P	E	E	A	P	A	P	L	K	P	W	F	A	I	P	G	P	V	A	E	E	Y	S	I	A	F	G	H	W	A	S	L	E	G	K	G	T	P	E	G	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	A	I	K	S	G	L	Y	D	V	V	I	Y	G	H	T	H	.	E	R	V	F	E	E	V	D	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S						S	S		.								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
																																																					105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.
		241	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		Y	A	L	D	T	G	C	.	.	.	C	W	G	G	T	L	T	C	L	R	W	E	D	K	Q
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		L	V	I	N	P	G	E	C	C	G	Y	L	T	G	I	P	T	I	G	I	L	D	T	E	K
Template Known Secondary structure									S	S		T	T	T	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions