 |
Job Description | P07364 | Confidence | 95.93% | Date | Thu Jan 5 11:00:17 GMT 2012 |
Rank | 241 | Aligned Residues | 113 |
% Identity | 15% | Template | d1mjfa_ |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| Spermidine synthase
|
Resolution | 1.80 |
|
 |
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | G | E | Y | R | V | W | S | A | A | A | S | T | G | E | E | P | Y | S | I | A | M | T | L | A | D | T | L | G | T | A | P | G | R | W | K | V | F | A | S | D | I | D | T | E | V | L | E | K | A | R | S | G | I | Y | R | H | E | E | L | K | N | L | T | P | Q | Q | L | Q | R | Y | F | M | R | G | T | G | P | H | E |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |
|
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . |
Template Sequence |   |
P | K | P | K | R | V | L | V | I | G | G | G | D | G | G | T | V | R | E | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | Q | H | D | V | D | E | V | I | M | V | E | I | D | E | D | V | I | M | V | S | K | D | . |
. |
. |
. |
. |
. |
. |
L | I | K | I | D | N | G | L | L | E | A | M | L | N | G | K | H | . |
. |
. |
. |
Template Known Secondary structure |   |
S |
|
|
|  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | T | T | S |
|
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  | T |
| T | T | T | T |  |  |  |  |  |  | T | T |
|
| . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
  |
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
Predicted Secondary structure |   |
|  |  |  |  |
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | V | R | V | R | Q | E | L | A | N | Y | V | D | F | A | P | L | N | L | L | A | K | Q | Y | T | V | P | G | P | F | D | A | I | F | C | R | N | V | M | I | Y | F | D | Q | T | T | Q | Q | E | I | L | R | R | F | V | P | L | L | K | P | D | G | L | L | F | A |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|   |
|   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |
|
|   |
|   |   |   |
|
|   | . |   |   |
|   |   |   |   |   |
|
|   |
|
| . | . | . |   |
|   |   |
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | K | A | K | L | T | I | G | D | G | F | . |
E | F | I | K | N | N | R | G | F | D | V | I | I | . |
. |
. |
A | D | S | T | D | P | V | L | F | S | E | E | F | Y | R | Y | V | Y | D | A | L | N | N | P | G | I | Y | V | T |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | S | S |  |  |  |  |  | S |
|  |  | . |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . |  |  |
|
|
|
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|  |  | . |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
133 | . | . | . | . | . | . | 140 | . | . | . | |
. | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|