Job Description P07364 Confidence 97.71% Date Thu Jan 5 11:00:17 GMT 2012 Rank 198 Aligned Residues 122 % Identity 18% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	F	P	L	L	A	D	H	A	R	R	R	S	G	E	Y	R	V	W	S	A	A	A	S	T	G	E	E	P	Y	S	I	A	M	T	L	A	D	T	L	G	T	A	P	G	R	W	K	V	F	A	S	D	I	D	T	E	V	L	E	K	A	R	S	G	I	Y	R	H	E	E	L	K	N	L	T	P	Q	Q
Query Conservation
Alig confidence																													.	.	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	G	A	R	A	F	I	D	A	H	Q	D	A	S	K	L	R	I	T	H	L	G	G	G	A	C	.	.	.	.	T	X	A	R	Y	F	A	D	V	.	.	.	.	Y	P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S		G	G	G							S		G	G	G	.	.	.	.										.	.	.	.	S	T	T								S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		L	Q	R	Y	F	M	R	G	T	G	P	H	E	G	L	V	R	V	R	Q	E	L	A	N	Y	V	D	F	A	P	L	N	L	L	A	K	Q	Y	T	V	P	G	P	F	D	A	I	F	C	R	N	V	M	I	Y	F	D	Q	T	T	Q	.	.	Q	E	I	L	R	R	F	V	P	L	L	K	P	D	G	L	L
Query Conservation																																																															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																					.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	F	D	I	P	R	A	P	R	V	K	I	R	V	D	D	A	R	X	V	A	E	S	F	T	P	.	A	S	R	D	V	I	I	R	D	V	F	A	G	A	I	T	P	Q	N	F	T	T	V	E	F	F	E	H	C	H	R	G	L	A	P	G	G	L	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		S					T	T	T						S								T			T	.	T										S	T	T	S				G	G	G	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
																129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		259	260
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		194	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions