Job Description P07364 Confidence 98.75% Date Thu Jan 5 11:00:17 GMT 2012 Rank 64 Aligned Residues 157 % Identity 13% Template c3fzgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of the 16s rrna methylase arma Resolution 2.00 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	F	G	H	Y	L	N	L	L	E	S	N	Q	H	S	G	E	W	Q	A	F	I	N	S	L	T	T	N	L	T	A	F	F	R	E	A	H	H	F	P	L	L	A	D	H	A	R	R	R	S	G	E	Y	R	V	W	S	A	A	A	S	T	G	E	E	P	Y	S	I	A	M	T	L	A	D	T	L	G
Query Conservation
Alig confidence																		.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Template Sequence		Y	P	N	W	D	K	L	L	K	K	Y	N	Q	G	Q	L	.	.	.	.	.	S	I	E	D	L	L	K	I	H	S	S	T	N	E	R	V	A	T	L	N	D	F	Y	T	Y	V	F	G	N	I	K	H	V	S	S	I	L	D	F	G	C	G	F	N	P	L	A	L	Y	Q	W	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	S		.	.	.	.	.									S					T	T	G	G	G												S				S						T		T	T									.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	P	G	R	W	K	V	F	A	S	D	I	D	T	E	V	L	E	K	A	R	S	G	I	Y	R	H	E	E	L	K	N	L	T	P	Q	Q	L	Q	R	Y	F	M	R	G	T	G	P	H	E	G	L	V	R	V	R	Q	E	L	A	N	Y	V	D	F	A	P	L	N	L	L	A	K	Q	Y	T	V	P	G
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		N	E	N	E	K	I	I	Y	H	A	Y	D	I	D	R	A	E	I	A	F	L	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	G	K	L	K	T	T	I	K	Y	R	F	L	N	K	E	S	D	V	Y	K	.	.	G
Template Known Secondary structure			S	S										S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S			S	S												T	T	.	.	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																																	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	D	A	I	F	C	R	N	V	M	I	Y	F	D	Q	T	T	Q	Q	E	I	L	R	R	F	V	P	L	L	K	P	D	G	L	L	F	A	G	H	S	E	N	F	S	H
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		T	Y	D	V	V	F	L	L	K	M	L	P	V	L	.	.	K	Q	Q	D	V	N	I	L	D	F	L	Q	L	F	H	T	Q	N	F	V	I	S	F	P	I	K	S	L	S	E
Template Known Secondary structure										T						.	.			T	T									T
Template Predicted Secondary structure																.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions