Job Description P07364 Confidence 98.72% Date Thu Jan 5 11:00:17 GMT 2012 Rank 70 Aligned Residues 116 % Identity 20% Template c3eeyJ_ PDB info PDB header:transferase Chain: J: PDB Molecule:putative rrna methylase; PDBTitle: crystal structure of putative rrna-methylase from clostridium2 thermocellum Resolution 2.20 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	A	D	H	A	R	R	R	S	G	E	Y	R	V	W	S	A	A	A	S	T	G	E	E	P	Y	S	I	A	M	T	L	A	D	T	L	G	T	A	P	G	R	W	K	V	F	A	S	D	I	D	T	E	V	L	E	K	A	R	S	G	I	Y	R	H	E	E	L	K	N	L	T	P	Q	Q	L	Q	R
Query Conservation
Alig confidence													.	.	.																								.	.	.	.	.	.	.																			.	.	.	.								.	.	.	.	.	.	.
Template Conservation													.	.	.																								.	.	.	.	.	.	.																			.	.	.	.								.	.	.	.	.	.	.
Template Sequence		D	Y	I	K	M	F	V	K	E	G	D	.	.	.	T	V	V	D	A	T	C	G	N	G	N	D	T	A	F	L	A	S	L	V	G	E	N	.	.	.	.	.	.	.	G	R	V	F	G	F	D	I	Q	D	K	A	I	A	N	T	T	K	.	.	.	.	K	L	T	D	L	N	L	.	.	.	.	.	.	.
Template Known Secondary structure										T	T		.	.	.					S			T	T	S												T	T	.	.	.	.	.	.	.								S											.	.	.	.					T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.																								.	.	.	.	.	.	.																			.	.	.	.								.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.
Query Sequence		Y	F	M	R	G	T	G	P	H	E	G	L	V	R	V	R	Q	E	L	A	N	Y	V	D	F	A	P	L	N	L	L	A	K	Q	Y	T	V	P	G	P	F	D	A	I	F	C	R	N	V	.	.	.	.	.	.	.	.	M	I	Y	F	D	Q	T	T	Q	Q	E	I	L	R	R	F	V	P	L	L	K	P	D
Query Conservation																																																			.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.			.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	R	V	T	L	I	K	D	G	H	Q	N	M	D	K	Y	I	D	C	P	V	K	A	V	M	F	.	N	L	G	Y	L	P	S	G	D	H	S	I	S	T	R	P	E	T	T	I	Q	A	L	S	K	A	M	E	L	L	V	T	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G						S		G	G	G	G	G	G	T			S								.			S			T	T	S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
																					71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		256	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	I	T	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions