Job Description P07364 Confidence 98.70% Date Thu Jan 5 11:00:17 GMT 2012 Rank 74 Aligned Residues 122 % Identity 20% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

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		103	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		F	P	L	L	A	D	H	A	R	R	R	S	.	G	E	Y	R	V	W	S	A	A	A	S	T	G	E	E	P	Y	S	I	A	M	T	L	A	D	T	L	G	T	A	P	G	R	W	K	V	F	A	S	D	I	D	T	E	V	L	E	K	A	R	S	G	I	Y	R	H	E	E	L	K	N	L	T	P	Q	Q	L
Query Conservation														.
Alig confidence														.														.	.	.	.												.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.												.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	A	L	Q	E	R	L	G	P	E	G	V	R	G	R	Q	V	L	D	L	G	A	G	Y	G	.	.	.	.	A	L	T	L	P	L	A	R	M	G	A	.	.	.	.	.	.	E	V	V	G	V	E	D	D	L	A	S	V	L	S	L	Q	K	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T	T	T	T							T		T	T	S	.	.	.	.	T	T							T	T		.	.	.	.	.	.							S	B												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.												.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		Q	R	Y	F	M	R	G	T	G	P	H	E	G	L	V	R	V	R	Q	E	L	A	N	Y	V	D	F	A	P	L	N	L	L	A	K	Q	Y	T	V	P	G	P	F	D	A	I	F	C	R	N	V	M	I	Y	.	.	.	F	D	Q	T	T	Q	Q	E	I	L	R	R	F	V	P	L	L	K	P	D	G	L	L
Query Conservation																																																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																						.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	N	A	L	K	A	Q	A	L	H	S	D	V	.	D	E	A	L	T	E	E	A	R	F	D	I	I	V	T	N	P	P	F	H	V	G	G	A	V	I	L	D	V	A	Q	A	F	V	N	V	A	A	A	R	L	R	P	G	G	V	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T									S	T	.	T	T	T	S		T	T														T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
																				276	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	G	H	S	E	N	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	V	S	N	P	F	L	K
Template Known Secondary structure							T	T	S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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