Job Description P07364 Confidence 97.80% Date Thu Jan 5 11:00:17 GMT 2012 Rank 192 Aligned Residues 129 % Identity 24% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	F	F	R	E	A	H	H	F	P	L	L	A	D	H	A	R	R	R	S	G	E	Y	R	V	W	S	A	A	A	S	T	G	E	E	P	Y	S	I	A	M	T	L	A	D	T	L	G	T	A	P	G	R	W	K	V	F	A	S	D	I	D	T	E	V	L	E	K	A	R	S	G	I	Y	R	H	E	E	L
Query Conservation
Alig confidence																							.	.	.											.	.	.	.									.	.	.	.	.																						.	.	.	.
Template Conservation																							.	.	.											.	.	.	.									.	.	.	.	.																						.	.	.	.
Template Sequence		T	G	Y	Y	L	D	Q	R	D	S	R	L	A	T	R	R	Y	V	E	N	K	.	.	.	R	V	L	N	C	F	S	Y	T	G	.	.	.	.	G	F	A	V	S	A	L	X	.	.	.	.	.	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	.	.	.	.	N	V	E	L
Template Known Secondary structure		T	S	S		G	G	G												T	T		.	.	.						T		T	T	T	.	.	.	.									.	.	.	.	.	T	T		S							S											.	.	.	.
Template Predicted Secondary structure																							.	.	.											.	.	.	.									.	.	.	.	.																						.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.								230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																										.	.	.																	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.																	.	.	.	.	.	.	.
Query Sequence		K	N	L	T	P	Q	Q	L	Q	R	Y	F	M	R	G	T	G	P	H	E	G	L	V	R	V	R	Q	E	L	A	N	Y	V	D	F	A	P	L	N	L	.	.	.	L	A	K	Q	Y	T	V	P	G	P	F	D	A	I	F	C	.	.	.	.	.	.	.	R	N	V	M	I	Y	F	D	Q	T	T	Q	Q	E
Query Conservation																																										.	.	.																	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	L	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	A	E	F	V	R	D	D	V	F	K	L	L	R	T	Y	R	D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L	X	G	A	C	R	G	Y	K	D
Template Known Secondary structure		T	T			G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G						S												T	T											S	S		S	S	T	T		S	S	S				T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270																										.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	R	R	F	V	P	L	L	K	P	D	G	L	L	F	A	G	H	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	X	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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