Job Description P07364 Confidence 96.23% Date Thu Jan 5 11:00:17 GMT 2012 Rank 238 Aligned Residues 98 % Identity 21% Template c3adnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli. Resolution 2.90 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	Y	R	V	W	S	A	A	A	S	T	G	E	E	P	Y	S	I	A	M	T	L	A	D	T	L	G	T	A	P	G	R	W	K	V	F	A	S	D	I	D	T	E	V	L	E	K	A	R	S	G	I	Y	R	H	E	E	L	K	N	L	T	P	Q	Q	L	Q	R	Y	F	M	R	G	T	G	P	H	E
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																							.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	.	.	.	.	.	.	.	.	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	P	N	H	N	A	G	.	.
Template Known Secondary structure		S									S			S	S							T	.	.	.	.	.	.	.	.	T		T	T									S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S					T	T	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																			120	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	R	V	R	Q	E	L	A	N	Y	V	D	F	A	P	L	N	L	L	A	K	Q	Y	T	V	P	G	P	F	D	A	I	F	C	R	N	V	M	I	Y	F	D	Q	T	T	Q	Q	E	I	L	R	R	F	V	P	L	L	K	P	D	G	L	L	F	A
Query Conservation
Alig confidence		.	.	.	.														.	.	.	.	.	.	.	.													.	.	.	.					.	.	.	.	.
Template Conservation		.	.	.	.														.	.	.	.	.	.	.	.													.	.	.	.					.	.	.	.	.
Template Sequence		.	.	.	.	S	Y	D	D	P	R	F	K	L	V	I	V	N	.	.	.	.	.	.	.	.	Q	T	S	Q	T	F	D	V	I	I	S	D	.	.	.	.	C	T	S	A	.	.	.	.	.	F	Y	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A
Template Known Secondary structure		.	.	.	.		T	T		T	T								.	.	.	.	.	.	.	.		T	T										.	.	.	.			T	T	.	.	.	.	.								T
Template Predicted Secondary structure		.	.	.	.														.	.	.	.	.	.	.	.													.	.	.	.					.	.	.	.	.
Template SS confidence
						128	.	130	.	.	.	.	.	.	.	.	.	140									.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions