Job Description P07364 Confidence 98.36% Date Thu Jan 5 11:00:17 GMT 2012 Rank 126 Aligned Residues 107 % Identity 19% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R	S	G	E	Y	R	V	W	S	A	A	A	S	T	G	E	E	P	Y	S	I	A	M	T	L	A	D	T	L	G	T	A	P	G	R	W	K	V	F	A	S	D	I	D	T	E	V	L	E	K	A	R	S	G	I	Y	R	H	E	E	L	K	N	L	T	P	Q	Q	L	Q	R	Y	F	M	R	G	T	G
Query Conservation
Alig confidence																			.	.	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																			.	.	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	.	.	.	.	V	L	S	V	A	F	A	R	H	.	.	.	.	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	A	A	N	G	.
Template Known Secondary structure		S		T	T			S	B			B	T	T		T	T	S	.	.	.	.										.	.	.	.		T	T		B						S	B										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	.
Template Predicted Secondary structure																			.	.	.	.										.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.																			.	240	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		P	H	E	G	L	V	R	V	R	Q	E	L	A	N	Y	V	D	F	A	P	L	N	L	L	A	K	Q	Y	T	V	P	G	P	F	D	A	I	F	C	R	N	V	M	I	.	.	.	Y	F	D	Q	T	T	Q	Q	E	I	L	R	R	F	V	P	L	L	K	P	D	G	L	L	F	A
Query Conservation																																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	G	E	V	F	A	S	N	V	F	S	.	.	.	E	V	K	G	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.									S	T	T	T	.	.	.	T			S													S	S	S															G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
															245	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions