Job Description P33362 Confidence 96.56% Date Thu Jan 5 11:52:05 GMT 2012 Rank 39 Aligned Residues 222 % Identity 11% Template d2czla1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.55

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	V	G	S	K	I	D	T	E	G	A	L	L	G	N	I	I	L	Q	V	L	E	S	H	G	V	P	T	V	N	K	V	Q	L	G	T	T	P	V	V	R	G	A	I	T	S	G	E	L	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W	K	N	A	Q	Q	G	Y
Query Conservation
Alig confidence										.																										.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																										.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	R	L	G	F	S	P	.	P	N	D	T	F	I	F	Y	A	L	V	H	G	R	V	E	S	P	V	P	L	E	P	V	L	.	.	E	D	V	E	T	L	N	R	W	A	L	E	G	R	L	P	L	T	K	L	S	Y	A	A	Y	A	Q	V	R	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.												T	T	S	S			S	S							.	.												T	T			S										T	T		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.																										.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	V	K	K	L	D	S	E	H	N	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	T	S	L	A	D	L	S	R	Y	L	Q	E	G	G	T	F	K	L	A	A	S	A	E	F	I	E	R	A	D	A	L	P	A	F	E	K	A	Y	G	F	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.									.	.	.	.	.	.	.									.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.									.	.	.	.	.	.	.									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	Y	V	A	L	R	S	G	G	A	L	G	R	G	V	G	P	L	V	V	A	R	.	.	.	.	.	.	.	G	P	L	Q	A	L	E	G	.	.	.	.	.	.	.	L	R	V	A	V	P	G	R	.	.	.	.	H	T	T	A	Y	F	L	L	S	L	Y	A	Q	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.					S	S	S					S	S								S	.	.	.	.	.	.	.	S			S			T	T	.	.	.	.	.	.	.						S		T	.	.	.	.	T	S											S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.									.	.	.	.	.	.	.									.	.	.	.
Template SS confidence
													68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.								.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.																			.	.	.	.	.	.
Query SS confidence																																							.																			.	.	.	.	.	.
Query Sequence		L	G	Q	D	Q	L	L	S	L	A	G	G	D	T	A	V	T	I	K	A	A	A	Q	Q	T	S	G	V	N	A	A	M	A	Y	G	T	D	.	G	P	V	A	A	L	G	L	Q	T	L	S	D	P	Q	G	V	Q	.	.	.	.	.	.	P	I	Y	A	P	A	P	V	V	R	E	S	V	L	R	E	Y	P
Query Conservation																																							.																			.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																				.																			.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.
Template Sequence		F	V	P	V	E	V	R	Y	D	R	.	.	.	.	.	.	.	.	I	L	P	M	V	A	Q	G	E	V	E	A	G	L	I	I	H	E	S	R	F	T	Y	P	R	Y	G	L	V	Q	V	V	D	L	G	A	W	W	E	E	R	T	G	L	P	L	P	L	G	A	I	L	A	R	R	D	L	G	E	G	L	I
Template Known Secondary structure									G	G	G	.	.	.	.	.	.	.	.							T	T	S	S	S						T	T					G	G	G	G	T																S	S											G	G	G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		Q	M	A	Q	W	L	Q	P	V	F	A	S	L	D	A	K	T	L	Q	Q	L	N	A	S	I	A	V	E	G	.	L	D	A	K	K	V	A	A	D	Y	L	K	Q
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		R	A	L	D	E	A	V	R	R	S	V	A	Y	A	L	A	H	P	E	E	A	L	D	Y	M	R	A	H	A	Q	E	L	S	D	E	V	I	W	A	H	V	H	T
Template Known Secondary structure																		S	G	G	G	G									T	T	S
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions