Job Description P33362 Confidence 98.91% Date Thu Jan 5 11:52:05 GMT 2012 Rank 23 Aligned Residues 210 % Identity 14% Template d1p99a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	V	G	S	K	I	D	T	E	G	A	L	L	G	N	I	I	L	Q	V	L	E	S	H	G	V	P	T	V	N	K	V	Q	L	G	T	T	P	V	V	R	G	A	I	T	S	G	E	L	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W	K	N	A	Q	Q	G	Y
Query Conservation
Alig confidence																.	.																			.																																						.	.	.	.	.	.	.	.
Template Conservation																.	.																			.																																						.	.	.	.	.	.	.	.
Template Sequence		K	V	T	I	G	V	A	S	N	D	T	K	A	W	.	.	E	K	V	K	E	L	A	K	K	D	D	I	D	V	E	I	K	H	.	F	S	D	Y	N	L	P	N	K	A	L	N	D	G	D	I	D	M	N	A	F	Q	H	F	A	F	L	D	Q	Y	K	K	A	H	K	G	T	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S	S						.	.								G	G	G	T								.		S	S	T	T	S							T	T	S	S	S																		T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.																			.																																						.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	K	V	K	K	L	D	S	E	H	N	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	T	S	L	A	D	L	S	R	Y	L	Q	E	G	G	T	F	K	L	A	A	S	A	E	F	I	E	R	A	D	A	L	P	A	F	E	K	A	Y	G	F	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.								.	.	.	.	.	.	.										.	.	.	.	.	.										.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.													.								.	.	.	.	.	.	.										.	.	.	.	.	.										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	K	I	S	A	L	S	T	T	V	L	A	P	.	L	G	I	Y	S	D	K	.	.	.	.	.	.	.	I	K	D	V	K	K	V	K	D	.	.	.	.	.	.	G	A	K	V	V	I	P	N	D	.	V	S	N	Q	A	R	A	L	K	L	L	E	A	A	G	L	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.						S	S	.	.	.	.	.	.	.		S		G	G	G			T	.	.	.	.	.	.	T								S	.														T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.								.	.	.	.	.	.	.										.	.	.	.	.	.										.
Template SS confidence
													109	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.								.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																			185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	G	Q	D	Q	L	L	S	L	A	G	G	D	T	A	V	T	I	K	A	A	A	Q	Q	T	S	G	V	N	A	A	M	A	Y	G	T	D	G	P	V	A	A	L	G	.	.	.	.	L	Q	T	L	S	D	P	Q	G	V	Q	P	I	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		K	L	K	K	D	F	G	L	A	G	T	V	K	D	I	T	S	N	P	K	H	L	K	I	T	A	V	D	A	Q	Q	T	.	.	.	.	.	.	.	A	R	A	L	S	D	V	D	I	A	V	I	N	N	G	V	A	T	K	A	G	K	D	P	K	N	D	P	I	F	L	E	K	S	N	S	D	A	V	K	P
Template Known Secondary structure					T	T			T	T			G	G	G					T	T									G	G	G	T	.	.	.	.	.	.	.	T	G	G	G	G	T	S	S												T	T			T	T	T	S		S						S	S	G	G	G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	P	V	V	R	E	S	V	L	R	E	Y	P	Q	M	A	Q	W	L	Q	P	V	F	A	S	L	D	A	K	T	L	Q	Q	L	N	A	S	I	A	V	E	G	L	D	A	K	K	V	A	A	D	Y	L	K	Q	K
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Sequence		Y	I	N	I	V	A	V	N	D	K	D	L	D	N	K	T	Y	A	K	I	V	E	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	K	E	.	.	A	Q	K	A	L	Q	E	D
Template Known Secondary structure		G								G	G	G	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S			.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.																					260	.	.	.			.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions