Job Description P33362 Confidence 43.59% Date Thu Jan 5 11:52:05 GMT 2012 Rank 127 Aligned Residues 219 % Identity 12% Template d1atga_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		V	K	V	G	S	K	I	D	T	E	G	A	L	L	G	N	I	I	L	Q	V	L	E	S	H	G	V	P	T	V	N	K	V	Q	L	G	T	T	P	V	V	R	G	A	I	T	S	G	.	E	L	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W	K	N	A	Q	Q	G	Y
Query Conservation																																																		.
Alig confidence													.																						.	.														.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																						.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	V	V	T	A	T	N	F	L	G	.	T	L	E	Q	L	A	G	Q	F	A	K	Q	T	G	H	A	V	V	I	S	S	.	.	G	S	S	G	P	V	Y	A	Q	I	V	N	G	A	P	Y	N	V	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	D	E	K	S	P	E
Template Known Secondary structure								G	G	G			.																						.	.												T	T				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure													.																						.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																		.	.	.	.	.	60	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	V	K	K	L	D	S	E	H	N	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	T	S	L	A	D	L	S	R	Y	L	Q	E	G	G	T	F	K	L	A	A	S	A	E	F	I	E	R	A	D	A	L	P	A	F	E	K	A	Y	G	F	K
Query Conservation
Alig confidence																		.	.	.	.																.	.	.										.	.	.
Template Conservation																		.	.	.	.																.	.	.										.	.	.
Template Sequence		K	L	D	N	Q	G	F	A	L	P	G	S	R	F	T	Y	.	.	.	.	A	I	G	K	L	V	L	W	S	A	K	P	G	L	V	.	.	.	D	N	Q	G	K	V	L	A	G	.	.	.	N	G	W	R	H	I	A	I	S	N	P	Q	I	A	P	Y	G	L	A	G	T	Q	V	L	T	H	L	G	L	L
Template Known Secondary structure						T	T		B		T	T						.	.	.	.										S	S	T	T	T	S	.	.	.		T	T	S	G	G	G	G	S	.	.	.	S	S		S							T	T	T														T	T
Template Predicted Secondary structure																		.	.	.	.																.	.	.										.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		L	G	Q	D	Q	L	L	S	L	A	G	G	D	T	A	V	T	I	K	A	A	A	Q	Q	T	S	G	V	N	A	A	M	A	Y	G	T	D	G	P	V	A	A	L	G	.	.	.	L	Q	T	L	S	D	P	Q	G	V	Q	P	I	Y	A	P	A	P	V	V	R	E	S	V	L	R	E	Y	P	Q	M	A	Q
Query Conservation																																														.	.	.
Alig confidence																					.																									.	.	.																									.	.	.
Template Conservation																					.																																																				.	.	.
Template Sequence		D	K	L	T	A	Q	E	R	I	V	E	A	N	S	V	G	Q	A	H	.	S	Q	T	A	S	G	A	A	D	L	G	F	V	A	L	A	Q	I	I	Q	A	A	A	K	I	P	G	S	H	W	F	P	P	A	N	Y	Y	E	P	I	V	Q	Q	A	V	I	T	K	S	T	A	.	.	.	E	K	A	N	A	E
Template Known Secondary structure							T	T						S	S						.					T	T	S	S	S						G	G	G	T			T	T	S			S	S							G	G	G	S										B	T	T		S	.	.	.
Template Predicted Secondary structure																					.																																																				.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	Q	P	V	F	A	S	L	D	A	K	T	L	Q	Q	L	N	A	S
Query Conservation
Alig confidence							.	.	.
Template Conservation							.	.	.
Template Sequence		Q	F	M	S	W	.	.	.	M	K	G	P	K	A	V	A	I	I	K	A
Template Known Secondary structure							.	.	.	T	T	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		209	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions