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Job DescriptionP33362
Confidence38.98%DateThu Jan 5 11:52:05 GMT 2012
Rank137Aligned Residues184
% Identity9%Templatec3uorB_
PDB info PDB header:sugar binding proteinChain: B: PDB Molecule:abc transporter sugar binding protein; PDBTitle: the structure of the sugar-binding protein male from the phytopathogen2 xanthomonas citri
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50. ........60.... .....70...... ...80.........90.........100
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Query Sequence  SPVKVGSKIDTEGALLGNIILQVLESH. GVPTVNKVQLGTT. . PVVRGAITSGEL. DIYPEYTGNGAFFFKDENDAAWKN
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Template Sequence  TTVRF. WAMGKEAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQP
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.TTTTSTT

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SGGGTT
B


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   28.30.. .......40.........50.........60.........70.........80.........90.........100......
 
   101........110...... ...120.........130.........140.... .....150.........160.........
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Query Sequence  AQQGYEKVKKLDSEHN. . . . . . . KLIWLTPAPANNTWTIAVRQDVAEKNKL. . . . TSLADLSRYLQEGGTFKLAASAEFI
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Template Sequence  YVARSKIVDPADYFPGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGYSQMPKTWAEMEQVMAAIKRKVGPDRYAIL
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GGGB
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   170.........180.........190.........200.........
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Query Sequence  ERADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQ
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Template Sequence  MPLNEFEQQLSFALQQDDRLLRDHDNYGNFRGAGFRKALG
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   187..190.........200.........210.........220......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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