Job Description P33362 Confidence 38.98% Date Thu Jan 5 11:52:05 GMT 2012 Rank 137 Aligned Residues 184 % Identity 9% Template c3uorB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:abc transporter sugar binding protein; PDBTitle: the structure of the sugar-binding protein male from the phytopathogen2 xanthomonas citri Resolution 2.20 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																													.														.	.													.
Query SS confidence																													.														.	.													.
Query Sequence		S	P	V	K	V	G	S	K	I	D	T	E	G	A	L	L	G	N	I	I	L	Q	V	L	E	S	H	.	G	V	P	T	V	N	K	V	Q	L	G	T	T	.	.	P	V	V	R	G	A	I	T	S	G	E	L	.	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W	K	N
Query Conservation																													.														.	.													.
Alig confidence							.																						.														.	.													.
Template Conservation							.
Template Sequence		T	T	V	R	F	.	W	A	M	G	K	E	A	E	V	V	A	E	L	V	A	D	F	E	K	Q	N	P	T	I	H	V	D	V	Q	N	I	P	M	T	A	A	H	E	K	L	L	T	A	F	A	A	D	G	L	P	D	V	C	Q	L	G	N	T	W	L	P	E	F	A	L	L	D	T	L	E	P	M	Q	P
Template Known Secondary structure							.				T														T	T	T	S	T	T										T	T	T	T	T									T	T				S						G	G	G							T	T		B
Template Predicted Secondary structure							.
Template SS confidence
		28	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		A	Q	Q	G	Y	E	K	V	K	K	L	D	S	E	H	N	.	.	.	.	.	.	.	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	.	.	.	.	T	S	L	A	D	L	S	R	Y	L	Q	E	G	G	T	F	K	L	A	A	S	A	E	F	I
Query Conservation																		.	.	.	.	.	.	.																													.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		Y	V	A	R	S	K	I	V	D	P	A	D	Y	F	P	G	V	W	D	T	N	L	V	D	G	T	L	Y	G	V	P	W	Y	V	D	T	R	L	L	F	Y	R	K	D	L	L	R	E	A	G	Y	S	Q	M	P	K	T	W	A	E	M	E	Q	V	M	A	A	I	K	R	K	V	G	P	D	R	Y	A	I	L
Template Known Secondary structure							S	S			G	G	G	B							T	T			T	T																								T	T		S	S				B																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	A	D	A	L	P	A	F	E	K	A	Y	G	F	K	L	G	Q	D	Q	L	L	S	L	A	G	G	D	T	A	V	T	I	K	A	A	A	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	L	N	E	F	E	Q	Q	L	S	F	A	L	Q	Q	D	D	R	L	L	R	D	H	D	N	Y	G	N	F	R	G	A	G	F	R	K	A	L	G
Template Known Secondary structure				T	T											T	S	S	S		S			T	T	T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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