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Job DescriptionP33362
Confidence99.33%DateThu Jan 5 11:52:05 GMT 2012
Rank16Aligned Residues204
% Identity15%Templatec3un6A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical protein saouhsc_00137; PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.... .....50.........60.........70.........80.........90.........100.
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Query Sequence  ASPVKVGSKIDTEGALLGNII. . LQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNA
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Template Sequence  QQVIKIGYLPITHSANLXXTKKLLSQYNHPKYKLELV. KFNNWPDLXDALNSGRIDGASTLIELAXKSKQKGS. . . . . . .
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SSGGGTSSS
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SSTTSSSTT
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   34.....40.........50.........60.........70 .........80.........90.........100.....
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  QQGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTFKLAASAEFIERADALPAFEKA
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Template Sequence  . . . . . . . . . . . . . . . NIKAVALGHHEGNVIXGQKGX. . . . . HLNEFNNNGD. . . . . . DYHFGIPHRYSTHYLLLEELRKQ
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GGG

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   106...110.........120...... ...130...... ...140.........150.........
 
   182.......190.........200.........210.........220...... ...230.........240......... 250........
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Query Sequence  YGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVA. . ALGLQTLSDPQGVQPIYAPAPVV. RESVLREYP
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Template Sequence  LKIKPGHFSYHEXSPAEXP. . . . . AALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHK
Template Known Secondary structure  TT

TTS

GGG.....TTS
STTSS

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   160.........170........ .180.........190.........200.........210.........220.........230....
 
   259260......
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Query Sequence  QMAQWLQP
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Template Sequence  DVAQAFVQ
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   235....240..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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