Job Description P33362 Confidence 98.91% Date Thu Jan 5 11:52:05 GMT 2012 Rank 24 Aligned Residues 209 % Identity 18% Template c3tqwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:methionine-binding protein; PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii Resolution 2.00 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	V	G	S	K	I	D	T	E	G	A	L	L	G	N	I	I	L	Q	V	L	E	S	H	G	V	P	T	V	N	K	V	Q	L	G	T	T	P	V	V	R	G	A	I	T	S	G	E	L	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W	K	N	A	Q	Q	G	Y
Query Conservation
Alig confidence																																			.																																							.	.	.	.	.	.	.	.
Template Conservation																																			.																																							.	.	.	.	.	.	.	.
Template Sequence		X	V	R	V	G	T	I	A	G	P	E	T	Q	L	X	E	V	A	K	Q	V	A	L	N	R	Y	G	L	H	V	N	I	I	.	T	F	S	D	Y	N	T	P	N	E	A	L	A	D	G	S	V	D	A	N	X	F	Q	H	L	P	Y	L	K	A	Q	I	E	X	R	G	Y	K	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T																									.			S		T	T	S							T	T	S		S																					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.																																							.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	K	V	K	K	L	D	S	E	H	N	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	T	S	L	A	D	L	S	R	Y	L	Q	E	G	G	T	F	K	L	A	A	S	A	E	F	I	E	R	A	D	A	L	P	A	F	E	K	A	Y	G	F	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.										.	.	.	.	.	.										.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.										.	.	.	.	.	.										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	S	I	G	K	T	F	V	Y	P	X	G	L	Y	S	K	K	.	.	.	.	.	.	.	I	T	A	L	T	Q	L	K	T	.	.	.	.	.	.	G	A	K	I	A	V	P	S	D	.	P	S	N	E	A	R	A	L	L	L	L	E	K	A	Q	L	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																	S	S	.	.	.	.	.	.	.		S	S	G	G	G			T	.	.	.	.	.	.	T								S	.														T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.										.	.	.	.	.	.										.
Template SS confidence
															72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
																	185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	G	Q	D	Q	L	L	S	L	A	G	G	D	T	A	V	T	I	K	A	A	A	Q	Q	T	S	G	V	N	A	A	M	A	Y	G	T	D	G	P	V	A	A	L	G	.	L	Q	T	L	S	D	P	Q	G	V	Q	P	I	Y	A	P	A	P	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																								.
Template Conservation																																.	.	.	.	.	.	.
Template Sequence		Q	L	K	T	H	I	N	A	T	P	X	D	I	A	S	N	P	K	K	L	K	I	V	E	L	D	A	A	Q	L	.	.	.	.	.	.	.	S	R	S	L	G	D	V	D	L	A	A	I	N	T	N	Y	A	I	P	A	G	L	S	P	S	R	D	A	L	L	T	E	G	P	N	S	P	Y	A	N	V	V	A
Template Known Secondary structure											G	G	G					T	T									G	G	G	G	.	.	.	.	.	.	.	G	G		T	T	T		S										G	G	G	T			T	T	T	T		S					S	S	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	S	V	L	R	E	Y	P	Q	M	A	Q	W	L	Q	P	V	F	A	S	L	D	A	K	T	L	Q	Q	L	N	A	S
Query Conservation
Alig confidence						.	.														.	.	.
Template Conservation						.	.														.	.	.
Template Sequence		V	R	E	D	.	.	D	K	N	D	P	R	L	K	Q	L	V	S	A	.	.	.	L	H	S	P	A	V	L	S	A	A	K	K
Template Known Secondary structure				G	G	.	.	G	T	T											.	.	.		T	S
Template Predicted Secondary structure						.	.														.	.	.
Template SS confidence
		200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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