Job Description P33362 Confidence 94.57% Date Thu Jan 5 11:52:05 GMT 2012 Rank 47 Aligned Residues 249 % Identity 12% Template c3rpwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter; PDBTitle: the crystal structure of an abc transporter from rhodopseudomonas2 palustris cga009 Resolution 1.65 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																					.																																			.	.
Query SS confidence																					.																																			.	.
Query Sequence		A	S	P	V	K	V	G	S	K	I	D	T	E	G	A	L	L	G	N	.	I	I	L	Q	V	L	E	S	H	G	V	P	T	V	N	K	V	Q	L	G	T	T	P	V	V	R	G	A	I	T	S	G	E	L	.	.	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W	K	N
Query Conservation																					.																																			.	.
Alig confidence																					.																																			.	.
Template Conservation
Template Sequence		S	N	V	V	I	X	Q	D	P	G	G	G	Y	G	D	A	L	R	K	V	X	Y	D	P	F	E	K	E	T	G	I	K	V	V	T	V	Q	E	A	R	S	G	P	R	I	K	A	Q	A	E	A	G	K	A	Q	W	D	L	T	F	I	F	D	Q	E	T	K	L	L	G	D	C	C	L	A	D	I	D	Y	S
Template Known Secondary structure			S																			T									S									S													T					S	B											T					B					G	G
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																.	.	.
Predicted Secondary structure																																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	Q	G	Y	E	K	V	K	K	L	D	S	E	H	N	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	.	T	S	L	A	D	L	S	R	Y	L	Q	E	G	G	T	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A
Query Conservation																																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	S	E	S	A	H	K	T	L	A	A	X	P	D	N	L	K	R	K	K	G	V	A	L	Q	V	I	G	V	G	L	V	Y	N	K	D	K	F	K	G	D	K	A	P	Q	T	W	A	D	F	W	D	V	K	K	F	P	G	R	R	C	X	P	A	W	P	R	F	T	F	E	A	A	L	X	A	D	G	V
Template Known Secondary structure		G	S										T	S		G	G	G			T	T															T	T	T	S		T	T	S	S			S							T	T	T	S		S						S	S	S	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	E	F	I	E	R	A	D	A	L	P	A	F	E	K	A	Y	G	F	K	L	G	Q	D	Q	L	L	S	L	A	G	G	D	T	A	V	T	I	K	A	A	A	Q	Q	T	S	G	V	N	A	A	M	A	Y	G	T	D	G	P	V	A	A	L	G	L	Q	T	L	S	D	P	Q	G	V	Q	P	I	Y	A
Query Conservation
Alig confidence																																					.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.
Template Sequence		T	K	D	K	L	Y	P	I	D	X	D	R	A	L	K	K	L	K	E	I	K	P	H	V	V	K	W	W	T	T	A	A	Q	P	P	.	.	.	.	.	.	Q	L	I	L	D	G	E	A	D	X	C	L	A	Y	T	G	S	X	S	K	L	A	L	E	G	A	P	I	D	L	T	F	N	Q	G	F	V	Y	Y
Template Known Secondary structure			T	T	S			S														G	G	G							S	T	T				.	.	.	.	.	.					T	T	S		S																T		S
Template Predicted Secondary structure																																					.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	P	V	V	R	E	S	V	L	R	E	Y	P	Q	M	A	Q	W	L	Q	P	V	F	A	S	L	D	A	K	T	L	Q	Q	L	N	A	S
Query Conservation
Alig confidence															.										.	.	.
Template Conservation															.										.	.	.
Template Sequence		D	F	F	S	I	P	K	G	A	P	N	Y	D	.	N	A	L	K	L	L	S	W	R	.	.	.	L	D	P	K	R	A	A	Q	L	T	S	T
Template Known Secondary structure							B	T	T		T	T			.										.	.	.	T
Template Predicted Secondary structure															.										.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions