Job Description P33362 Confidence 99.25% Date Thu Jan 5 11:52:05 GMT 2012 Rank 17 Aligned Residues 202 % Identity 17% Template c3qslA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50 Resolution 2.00 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		P	V	K	V	G	S	K	I	D	T	E	G	A	L	L	G	N	I	I	L	Q	.	.	V	L	E	S	H	G	V	P	T	V	N	K	V	Q	L	G	T	T	P	V	V	R	G	A	I	T	S	G	E	L	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W	K	N	A	Q	Q
Query Conservation																							.	.
Alig confidence																	.						.	.														.																																			.	.	.	.	.	.	.	.	.
Template Conservation																	.																					.																																			.	.	.	.	.	.	.	.	.
Template Sequence		Q	I	A	V	G	G	K	P	L	I	Y	Y	L	P	L	.	T	I	A	E	V	K	G	F	F	K	D	E	G	L	D	V	S	I	A	D	.	F	A	G	G	S	K	A	L	Q	A	V	V	G	G	S	A	D	V	V	S	G	A	F	E	H	T	L	S	L	Q	A	K	G	Q	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S		T	T	S	G	G	G				.						T	T					T	T								.		S	S										T	T	S		S						T									T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																					.																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	E	K	V	K	K	L	D	S	E	H	N	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	T	S	L	A	D	L	S	R	Y	L	Q	E	G	G	T	F	K	L	A	A	S	A	E	F	I	E	R	A	D	A	L	P	A	F	E	K	A	Y	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.										.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.										.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	R	A	F	A	L	Q	G	R	A	P	X	I	G	V	G	V	S	K	K	N	L	P	G	.	.	Y	K	G	P	A	D	L	K	G	.	.	.	.	.	.	.	R	K	I	G	V	T	A	P	G	S	S	T	N	X	V	V	N	F	F	L	A	K	H	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.								S	B	S	S									T	T	T		T	T	.	.			S	G	G	G	G	T	T	.	.	.	.	.	.	.						S	S	T	T	S													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.										.	.	.	.	.	.	.
Template SS confidence
															105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.									.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																										.	.																					.	.	.	.	.	.	.	.
Query SS confidence																																										.	.																					.	.	.	.	.	.	.	.
Query Sequence		F	K	L	G	Q	D	Q	L	L	S	L	A	G	G	D	T	A	V	T	I	K	A	A	A	Q	Q	T	S	G	V	N	A	A	M	A	Y	G	T	D	G	.	.	P	V	A	A	L	G	L	Q	T	L	S	D	P	Q	G	V	Q	P	I	Y	.	.	.	.	.	.	.	.	A	P	A	P	V	V	R	E	S	V
Query Conservation																																										.	.																					.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.																			.	.																					.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		L	K	A	S	D	V	S	F	I	G	V	G	A	G	A	G	A	V	.	.	.	.	T	A	L	R	S	G	Q	I	D	A	I	S	N	T	D	P	V	V	S	X	L	E	T	S	G	D	I	Q	I	I	V	D	T	R	T	L	K	D	T	K	E	I	F	G	G	N	X	P	A	G	C	L	Y	A	P	Q	A	F
Template Known Secondary structure				G	G	G	S							S	S					.	.	.	.						T	S		S						T	T								T	T									S	S									S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	Y	P	Q	M	A	Q	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	A	N	P	N	T	A	Q	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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