Job Description P33362 Confidence 97.37% Date Thu Jan 5 11:52:05 GMT 2012 Rank 32 Aligned Residues 169 % Identity 14% Template c3n5lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter; PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution Resolution 1.97 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		A	A	S	P	V	K	V	G	S	K	I	D	T	E	G	A	L	L	G	N	I	I	L	Q	V	L	E	S	H	.	.	.	.	G	V	P	T	V	N	K	V	Q	L	G	T	T	P	V	V	R	G	A	I	T	S	G	E	L	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Q	P	V	I	N	F	G	I	I	S	T	E	S	S	Q	N	L	K	S	I	W	E	P	F	L	K	D	X	S	Q	Q	T	G	Y	Q	V	K	A	F	.	F	A	P	D	Y	A	G	I	I	Q	G	X	R	F	D	K	V	D	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W
Template Known Secondary structure													S	S																					S	S						.			S	S										T	T	S		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.																			.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		K	N	A	Q	Q	G	Y	E	K	V	K	K	L	D	S	E	H	N	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	T	S	L	A	D	.	.	.	.	L	S	R	Y	L	Q	E	G	G	T	F	K	L	A	A	S	A	E	F	I	E	R	A	D	A
Query Conservation																																																					.	.	.	.
Alig confidence																																											.	.	.	.							.	.	.	.									.	.	.	.	.
Template Conservation																																											.	.	.	.																			.	.	.	.	.
Template Sequence		Y	G	N	K	A	A	X	E	A	V	D	R	A	H	G	E	I	F	A	Q	T	V	A	A	S	G	A	P	G	Y	W	S	L	L	I	A	N	K	D	S	K	.	.	.	.	I	D	S	L	E	D	X	L	A	N	A	K	S	L	T	F	G	N	.	.	.	.	.	G	D	P	N	S	T	S	G	Y	L	V	P
Template Known Secondary structure														S											T	T			S										T	T		S	.	.	.	.			S							T	G	G	G						.	.	.	.	.			T	T		T	T	T	T
Template Predicted Secondary structure																																											.	.	.	.																			.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		L	P	A	F	E	K	A	Y	G	F	K	L	G	Q	.	D	Q	L	L	S	L	A	G	G	D	T	A	V	T	I	K	A	A	A	Q	Q	T	S	G	V	N	A	A	M	A	Y	G	T	D	G
Query Conservation																.
Alig confidence																.														.	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		G	Y	Y	V	F	A	K	N	N	V	D	P	V	K	A	F	K	R	T	L	N	S	S	H	E	V	N	A	.	.	.	.	L	A	V	A	N	K	Q	V	D	V	A	T	F	N	T	E	G	X
Template Known Secondary structure					T	T	T	T	T	T							S	S												.	.	.	.					T	T	S	S	S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions