Job Description P33362 Confidence 97.15% Date Thu Jan 5 11:52:05 GMT 2012 Rank 33 Aligned Residues 227 % Identity 12% Template c3muqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633 Resolution 2.05 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		S	P	V	K	V	G	S	K	I	D	T	E	G	A	.	L	L	G	N	I	I	L	Q	V	L	E	S	H	G	V	P	T	V	N	K	V	Q	L	G	T	T	P	V	V	R	G	A	I	T	S	G	E	L	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W	K	N	A	Q	Q
Query Conservation																.
Alig confidence																.																						.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	V	R	L	A	T	T	T	S	T	Y	H	S	G	L	L	D	Y	L	L	P	Q	F	E	K	D	T	G	Y	K	V	D	V	I	A	.	.	A	G	T	G	K	A	L	K	X	G	E	N	G	D	V	D	L	V	X	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	P	K	A
Template Known Secondary structure																T	G	G	G	G	T																	.	.												T	T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.																		.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		G	Y	E	K	V	K	K	L	D	S	E	H	N	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	T	S	L	A	D	L	S	.	.	R	Y	L	Q	E	G	G	T	F	K	L	A	A	S	A	E	F	I	E	R	A	D	A	L	P	A	F	E	K	A
Query Conservation																																																		.	.
Alig confidence																					.	.	.	.	.	.														.	.									.	.
Template Conservation																					.	.	.	.	.	.														.	.
Template Sequence		E	G	T	F	V	E	K	G	Y	G	V	L	P	R	K	L	X	Y	N	.	.	.	.	.	.	D	F	V	I	V	G	P	K	A	D	P	A	K	.	.	I	K	D	D	E	S	V	L	D	V	F	K	E	I	A	N	K	N	A	T	F	I	S	R	G	D	D	S	G	T	H	K	K	E	X	G	F	W	A	Q
Template Known Secondary structure								T	T	S											.	.	.	.	.	.								T	T		T	T		.	.		T	T		S												T	T								S		S
Template Predicted Secondary structure																					.	.	.	.	.	.														.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	F	K	L	G	Q	D	Q	L	L	S	L	A	G	G	D	T	A	V	T	I	K	A	A	A	Q	Q	T	S	G	V	N	A	A	M	A	Y	G	T	D	G	P	V	A	A	L	G	L	Q	T	L	S	D	P	Q	G	V	Q	P	I	Y	A	P	A	P	V	V	R	E	S	V	L	R	E	Y	P	Q	M	A
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		T	K	I	E	P	N	F	G	G	Y	R	S	V	G	Q	G	X	G	P	T	L	N	X	.	A	S	E	X	Q	G	Y	T	X	S	D	R	G	T	W	L	A	Y	Q	N	K	L	D	L	E	I	L	F	Q	G	D	E	K	L	F	N	P	Y	Q	V	I	L	V	N	P	E	R	Y	P	T	I	N	Y	Q	G	A
Template Known Secondary structure			T					S	T	T															.					T														G	G	G		S									G	G	G											T	T	T		T	T	S
Template Predicted Secondary structure																									.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	L	Q	P	V	F	A	S	L	D	A	K	T	L	Q	Q	L	N	A
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		K	A	F	S	D	W	.	.	L	V	N	P	R	G	Q	E	L	I	N	G
Template Known Secondary structure								.	.			S
Template Predicted Secondary structure								.	.
Template SS confidence
		239	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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