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Job DescriptionP33362
Confidence36.17%DateThu Jan 5 11:52:05 GMT 2012
Rank140Aligned Residues163
% Identity9%Templatec3iouB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:maltose-binding protein, huntingtin fusion PDBTitle: huntingtin amino-terminal region with 17 gln residues -2 crystal c94
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70..... ....80.........90.........100.
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Query Sequence  AASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQLGTTPVVRGAITSGE. LDIYPEYTGNGAFFFKDENDAAWKNA
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Template Sequence  EEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPD
Template Known Secondary structure 
SSSB


TTSS


B

B

TTTT
S
SGGGT
B





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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   102.......110........ .120.........130.........140.........150.........160.........170.........
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Query Sequence  QQGYEKVKKLDSEHNKL. . IWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTFKLAASAEFIERADALPAFE
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Template Sequence  KAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNP. PKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLI
Template Known Secondary structure  TSS
TGGGGGG
STT



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SBSTTTTTT
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   83......90.........100.........110.........120..... ....130.........140.........150.........160.
 
   180......
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Query Sequence  KAYGFKL
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Template Conservation         
Template Sequence  AADGGYA
Template Known Secondary structure  TTT

S
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   162......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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