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Job DescriptionP33362
Confidence24.78%DateThu Jan 5 11:52:05 GMT 2012
Rank157Aligned Residues133
% Identity9%Templatec3h4zC_
PDB info PDB header:allergenChain: C: PDB Molecule:maltose-binding periplasmic protein fused with allergen PDBTitle: crystal structure of an mbp-der p 7 fusion protein
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70...... ...80.........90.........100..
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Query Sequence  ASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQLGTTPVVRGAITSGEL. DIYPEYTGNGAFFFKDENDAAWKNAQ
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Template Sequence  EGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPAA
Template Known Secondary structure  TT

TTS
TTT



SSTTTT
S
SGGGTT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   103......110...... ...120.........130.........140.........150.......
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Query Sequence  QGYEKVKKLDSEHN. . KLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEG
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Template Sequence  AFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNP. PKTWEEIPALDKEL
Template Known Secondary structure  B
TBSSSSB
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   84.....90.........100.........110.........120..... ....130.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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