 |
Job Description | P33362 | Confidence | 62.61% | Date | Thu Jan 5 11:52:05 GMT 2012 |
Rank | 99 | Aligned Residues | 55 |
% Identity | 13% | Template | c3eq1A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:porphobilinogen deaminase; |
PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution
|
Resolution | 2.80 Å |
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | V | K | V | G | S | K | I | D | T | E | G | A | L | L | G | N | I | I | L | Q | V | L | E | S | H | G | V | P | T | V | N | K | V | Q | L | G | T | T | P | V | V | R | G | A | I | T | S | G | E | L | D | I | Y | P |
Query Conservation |   |
  |   |
|   |
|
|   |   |   |
|
|
|   |   |
|
|
|   |
|   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|
| . |
|
|   |
|
|
|   |
|   |
|
|
|
|
|
Template Sequence |   |
R | V | I | R | V | G | T | R | K | S | Q | L | A | R | I | Q | T | D | S | V | V | A | T | L | K | A | S | Y | P | G | L | Q | F | E | I | I | A | F | T | K | E | . |
L | E | H | A | L | E | K | N | E | V | D | L | V | V |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |
|
|
|  |  | . |  |  |  |  |  |  | T | T | S |
| S |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|