Job Description P33362 Confidence 68.64% Date Thu Jan 5 11:52:05 GMT 2012 Rank 86 Aligned Residues 59 % Identity 19% Template c2xx7B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:glutamate receptor 2; PDBTitle: crystal structure of 1-(4-(1-pyrrolidinylcarbonyl)phenyl)-3-2 (trifluoromethyl)-4,5,6,7-tetrahydro-1h-indazole in complex with3 the ligand binding domain of the rat glua2 receptor and glutamate4 at 2.2a resolution. Resolution 2.20 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.																		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.												.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	A	S	P	V	K	V	G	S	K	I	D	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	L	L	G	N	I	I	L	Q	V	L	E	S	H	G	V	P	T	V	N	K	V	Q	L	.	.	.	.	.	.	.	.	.	.	.	G	T	T	P	V	V	R	G	A	I	T	S
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	N	K	T	V	V	V	T	T	I	L	E	S	P	Y	V	M	M	K	K	N	H	E	M	L	E	G	N	E	R	Y	E	G	Y	C	V	D	L	A	A	E	I	A	K	H	C	G	F	K	Y	K	L	T	I	V	G	D	G	K	Y	G	A	R	D	A	D	T	K	I	W	N	G	M	V	G	E	L	V	Y
Template Known Secondary structure														B	T	T	T	B				T	T		T	T			S	G	G	G			S														T									T	T						B		T	T	T			B									T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		74	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	D	I	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	A	D	I	A	I
Template Known Secondary structure		T	S		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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