Job Description P33362 Confidence 50.19% Date Thu Jan 5 11:52:05 GMT 2012 Rank 114 Aligned Residues 133 % Identity 9% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		A	A	S	P	V	K	V	G	S	K	I	D	T	E	G	A	L	L	G	N	I	I	L	Q	V	L	E	S	H	G	V	P	T	V	N	K	V	Q	L	G	T	T	P	V	V	R	G	A	I	T	S	G	E	L	.	D	I	Y	P	E	Y	T	G	N	G	A	F	F	F	K	D	E	N	D	A	A	W	K	N	A
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		E	E	G	K	L	V	I	W	I	N	G	D	K	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	D	T	G	I	K	V	T	V	E	H	P	D	K	L	E	E	K	F	P	Q	V	A	A	T	G	D	G	P	D	I	I	F	W	A	H	D	R	F	G	G	Y	A	Q	S	G	L	L	A	E	I	T	P	D
Template Known Secondary structure			T	T	S							T	T	S		S															S									T	T											S	S		S		S															T	T		B
Template Predicted Secondary structure
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		Q	Q	G	Y	E	K	V	K	K	L	D	S	E	H	.	.	.	N	K	L	I	W	L	T	P	A	P	A	N	N	T	W	T	I	A	V	R	Q	D	V	A	E	K	N	K	L	T	S	L	A	D	L	S	R	Y	L	Q	E	G
Query Conservation																.	.	.
Alig confidence																.	.	.												.																.
Template Conservation																														.																.
Template Sequence		K	A	F	Q	D	K	L	Y	P	F	T	W	D	A	V	R	Y	N	G	K	L	I	A	Y	P	I	A	V	.	E	A	L	S	L	I	Y	N	K	D	L	L	P	N	P	.	P	K	T	W	E	E	I	P	A	L	D	K	E	L
Template Known Secondary structure						T	S	B		T	T					T			T	T										.									T	T	T		S	S		.		S	B	S	T	T
Template Predicted Secondary structure																														.																.
Template SS confidence
		1084	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.		.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.		.	.	.	1130	.	.	.	.	.	.	.	.	.	1140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions