Return to main results Retrieve Phyre Job Id

Job DescriptionP21693
Confidence99.50%DateWed Jan 25 15:20:42 GMT 2012
Rank117Aligned Residues153
% Identity16%Templated1rifa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases DNA helicase UvsW
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  TMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKIL
Query Conservation       
  

  
  
  


 







      

  
        



 

  
  
    
             
Alig confidence 













































..































Template Conservation   

 

   
   
     

   





      
         ..  


 
   
  
                  
Template Sequence  EPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLARYYLENYEG. . KILIIVPTTALTTQMADDFVDYRLFSHAMIKK
Template Known Secondary structure 


S


TTS

SS..
SSTS

GGG
Template Predicted Secondary structure 














..








Template SS confidence 















































































   113......120.........130.........140.........150........ .160.........170.........180.........190
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  TLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFS
Query Conservation                                                                                  
Alig confidence 








....
























...














....



















Template Conservation           ....       


 
   
         ...    






    ....                



Template Sequence  IGGGASKDD. . . . KYKNDAPVVVGTWQTVVKQPKEWFS. . . QFGMMMNDECHLATG. . . . KSISSIISGLNNCMFKFGLS
Template Known Secondary structure 
STT
SSTT....


TT
S
TTS
GGGGG...GTGGG

....TTT
TT


Template Predicted Secondary structure 






....







...









....




Template SS confidence 















































































   191........ 200.........210.........220.... .....230......... 240.........250.........
 
   185....190
Predicted Secondary structure 





Query SS confidence 





Query Sequence  ATWPEA
Query Conservation        
Alig confidence 





Template Conservation 

    
Template Sequence  GSLRDG
Template Known Secondary structure  SS

TT
Template Predicted Secondary structure 



Template SS confidence 





   260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions