|   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | V | Q | A | A | A | L | P | A | I | L | A | G | K | D | V | R | V | Q | A | K | T | G | S | G | K | T | A | A | F | G | L | G | L | L | Q | Q | I | D | A | S | L | F | Q | T | Q | A | L | V | L | C | P | T | R | E | L | A | D | Q | V | A | G | E | L | R | R | L | A | R | F | L | P | N | T | K | I | L | T | L |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |
|   |
|   |
Template Sequence |   |
I | P | P | N | W | Y | P | D | A | R | A | M | Q | R | K | I | I | F | H | S | G | P | T | N | S | G | K | T | Y | H | A | I | Q | K | Y | F | S | . |
. |
. |
. |
. |
. |
. |
A | K | S | G | V | Y | C | G | P | L | K | L | L | A | H | E | I | F | E | K | S | N | A | A | . |
. |
. |
. |
. |
G | V | P | C | D | L | V |
Template Known Secondary structure |   |
| G | G | G | G |
|  |  |  |  | T | S |
|
|  |  |  |  |  |  |
| S | S | S | S | S | T | T |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | S | S | S |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 250 | . | . | . | . |
  |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | G | G | Q | P | F | G | M | Q | R | D | S | L | Q | H | A | P | H | I | I | V | A | T | P | G | R | L | L | D | H | L | Q | K | G | T | V | S | L | D | A | L | N | T | L | V | M | D | E | A | D | R | M | L | D | M | G | F | S | D | A | I | D | D | V | I | R | F | A | P | A | S | R | Q | T | L | L | F | S | A | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|
|
|   |
|   |
|   |
| . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
T | G | E | E | R | V | T | V | Q | P | N | . |
. |
G | K | Q | A | S | H | V | S | C | T | V | E | M | C | . |
. |
. |
. |
. |
. |
. |
. |
S | V | T | T | P | Y | E | V | A | V | I | D | E | I | Q | M | I | R | D | P | A | R | G | W | A | W | T | R | A | L | L | G | L | C | A | E | E | V | H | L | C | G | E | P | A |
Template Known Secondary structure |   |
| S | S |
|  |  |
|
| S | S | S | . | . | S |
|
|
| S |  |  |  |  |  | G | G | G |
| . | . | . | . | . | . | . | . |
| S | S | S |  |  |  |  |  |  |  |  |
| G | G | G | G | G |
| T | T | T |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
| G | G |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |  |
|  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
255 | . | . | . | . | 260 | . | . | . | . | . | |
|
. | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . |
  |
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | P | E | A | I | A | A | I | S | G | R | V | Q | R | D | P | L | A | I | E | I | D | S | T | D | A | L | P | P | I | E | Q | Q | F | Y | E | T | S | S | K | G | K | I | P | L | L | Q | R | L | L | S | L | H | Q | P | S | S | C | V | V | F | C | N | T | K | K | D | C | Q | A | V | C | D | A | L | N | E | V | G | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
A | I | D | L | V | M | E | L | M | Y | T | T | G | E | E | V | E | V | R | D | Y | K | R | L | T | P | I | S | V | L | D | H | A | L | E | S | L | D | N | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | P | G | D | C | I | V | C | F | S | K | N | D | I | Y | S | V | S | R | Q | I | E | I | R | G | L |
Template Known Secondary structure |   |
G |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
|
| S | S |
|  |  |  |
| S | S |
|
|
| S | S | T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| T | T |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
325 | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 |
  |
  |   |
267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | |
|
. | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | |
|
|
. | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | |
|
|
. | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
Query Sequence |   |
S | A | L | S | L | H | G | D | L | E | Q | R | D | R | D | Q | T | L | V | R | F | . |
. |
A | N | G | S | A | R | V | L | V | A | T | D | V | A | A | R | G | L | D | I | K | S | L | E | L | V | V | N | F | E | L | . |
. |
. |
A | W | D | P | E | V | H | V | H | R | I | G | R | T | A | R | A | G | . |
. |
. |
N | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |
|
|
|
|
|   |
|   |   |
|
|   |   |   |   | . | . | . |
|   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |
| . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
Template Conservation |   |
  |
|   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |
|   |   |
|
|
|
|   | . |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |
Template Sequence |   |
E | S | A | V | I | Y | G | S | L | P | P | G | T | K | L | A | Q | A | K | K | F | N | D | P | N | D | P | C | K | I | L | V | A | T | D | A | I | G | M | G | L | N | L | S | . |
I | R | R | I | I | F | Y | S | L | I | K | E | P | I | T | T | S | Q | A | L | Q | I | A | G | R | A | G | R | F | S | S | R | F | K | E |
Template Known Secondary structure |   |
|  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| S |
|
|  |  |  |  |
| G | G | G | G | S | S |
|
|
|
| . | B | S |  |  |  |  | S |
| S | B |
|
| B |
|
|  |  |  |  |  |  |  |  | T | T | B |
|
|
| T | T | T |
|
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
391 | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | |
. | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |
  |
  |   |
339 | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | A | I | S | F | C | A | P | E | E | A | Q | R | A | N | I | I | S | D | M | L | Q | I | K | L | N | W | Q | T | P | P | A | N | S | S | I | A | T | L | E | A | E |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
G | E | V | T | T | M | N | . |
H | E | D | L | S | L | L | K | E | I | L | K | R | P | V | D | P | I | R | A | A | G | L | H | P | T | A | E | Q | I | E | M | F | A | Y |
Template Known Secondary structure |   |
 |  |  |  |  | S | S | . |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
| . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
481 | . | . | . | . | . | . | |
. | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . |
  |