Job Description P21693 Confidence 99.47% Date Wed Jan 25 15:20:42 GMT 2012 Rank 118 Aligned Residues 115 % Identity 18% Template c2fzlA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad25, xpb; PDBTitle: structure of c-terminal domain of archaeoglobus fulgidus xpb Resolution 2.90 Å

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	K	I	P	L	L	Q	R	L	L	S	L	H	Q	P	S	S	C	V	V	F	C	N	T	K	K	D	C	Q	A	V	C	D	A	L	N	E	V	G	Q	S	A	L	S	L	H	G	D	L	E	Q	R	D	R	D	Q	T	L	V	R	F	A	N	G	S	A	R	V	L	V	A	T	D	V	A	A	R	G	L
Query Conservation
Alig confidence																																						.	.	.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		K	N	K	I	R	K	L	R	E	I	L	E	R	H	R	K	D	K	I	I	I	F	T	R	H	N	E	L	V	Y	R	I	S	K	V	F	.	.	.	.	.	L	I	P	A	I	T	H	R	T	S	R	E	E	R	E	E	I	L	E	G	F	R	T	G	R	F	R	A	I	V	S	S	Q	V	L	D	E	G	I
Template Known Secondary structure															T	T	T	S							S												S	.	.	.	.	.							S	S	S		S											T	T	S	S		S					S	S		S	S	S	S
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.						370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	K	S	L	E	L	V	V	N	F	E	L	A	W	D	P	E	V	H	V	H	R	I	G	R	T	A	R	A	G	N	S	G	L	A	I	S	F	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	P	D	A	N	V	G	V	I	M	S	G	S	G	S	A	R	E	Y	I	Q	R	L	G	R	I	L	R	P	S	K	G	K	K	E	A	V	L	Y
Template Known Secondary structure														S	S	S																	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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