Job Description P21693 Confidence 95.16% Date Wed Jan 25 15:20:42 GMT 2012
Rank 188 Aligned Residues 69
% Identity 23% Template c1xpuB_
PDB info
PDB header: transcription/rnaChain: B: PDB Molecule: rho transcription termination factor;
PDBTitle: structural mechanism of inhibition of the rho transcription2 termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-3 dihydrobicyclomycin (fpdb)
Resolution 3.05 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
4 . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . .
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Predicted Secondary structure  
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Query Sequence  
F S T L N V L P P A Q L T N L N E L G Y L T M T P V Q A A A L P A I L .
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A G K D V R V Q A K T G S G K T A A F G L G L L Q Q I D A S L F Q T Q A L V L C
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
F E N L T P L H A N .
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S R L R M G S T E D L T A R V L D L A S P I G R G Q R G L I V A P P K A G K T M L L Q N .
I A Q S I A Y N H P D C V L M V L L
Template Known Secondary structure  
G G G G G . . . . . S S T S T T S S S S . T T S
Template Predicted Secondary structure  
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Template SS confidence  
   
133 . . . . . . 140 . .
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]