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Job DescriptionP21693
Confidence95.16%DateWed Jan 25 15:20:42 GMT 2012
Rank188Aligned Residues69
% Identity23%Templatec1xpuB_
PDB info PDB header:transcription/rnaChain: B: PDB Molecule:rho transcription termination factor; PDBTitle: structural mechanism of inhibition of the rho transcription2 termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-3 dihydrobicyclomycin (fpdb)
Resolution3.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30........ .40.........50.........60.........70........
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Query Sequence  FSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAIL. . . AGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLC
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Template Sequence  FENLTPLHAN. . . . . SRLRMGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQN. IAQSIAYNHPDCVLMVLL
Template Known Secondary structure  GG




GGG.....S



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   133......140.. .......150.........160.........170.........180...... ...190.........200....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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