Job Description P21693 Confidence 95.17% Date Wed Jan 25 15:20:42 GMT 2012 Rank 187 Aligned Residues 44 % Identity 20% Template c1sxjB_ PDB info PDB header:replication Chain: B: PDB Molecule:activator 1 37 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		T	A	F	S	T	L	N	V	L	P	P	A	Q	L	T	N	L	N	E	L	G	Y	L	T	M	T	P	V	Q	A	A	A	L	P	A	I	L	A	G	K	.	.	D	V	R	V	Q	A	K	T	G	S	G	K	T	A	A	F	G	L	G	L
Query Conservation																																										.	.
Alig confidence									.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation									.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	L	S	D	I	V	.	G	N	K	E	T	I	D	R	L	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	K	D	G	N	M	P	H	M	I	I	S	G	M	P	G	I	G	K	T	T	S	V	H	C	L	A
Template Known Secondary structure		S	S	G	G	G			.	S		T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S											S	T	T	S	S
Template Predicted Secondary structure									.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.																.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions