Return to main results Retrieve Phyre Job Id

Job DescriptionP21693
Confidence95.34%DateWed Jan 25 15:20:42 GMT 2012
Rank183Aligned Residues30
% Identity13%Templatec1ojlF_
PDB info PDB header:response regulatorChain: F: PDB Molecule:transcriptional regulatory protein zrar; PDBTitle: crystal structure of a sigma54-activator suggests the2 mechanism for the conformational switch necessary for3 sigma54 binding
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.......
Predicted Secondary structure 









Query SS confidence 





























Query Sequence  PVQAAALPAILAGKDVRVQAKTGSGKTAAF
Query Conservation    
  

  
  
  


 







   
Alig confidence 





























Template Conservation   
   
         


 







 

Template Sequence  HLLNEIAMVAPSDATVLIHGDSGTGKELVA
Template Known Secondary structure 
STT



TTSS
Template Predicted Secondary structure 










Template SS confidence 





























   150.........160.........170.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions