Job Description P0A8G9 Confidence 8.07% Date Thu Jan 5 11:07:49 GMT 2012 Rank 38 Aligned Residues 52 % Identity 15% Template c2eqbC_ PDB info PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	L	S	E	L	E	Q	I	V	T	R	L	E	S	G	D	L	P	L	E	E	A	L	N	E	F	E	R	G	V	Q	L	A	R	Q	G	Q	A	K	L	Q	Q	A	E	Q	R	V	Q	I	L	L	S	D	N	E	D	A	S	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		E	E	E	A	D	K	L	N	K	E	V	E	D	L	T	A	.	.	.	.	.	.	.	.	.	S	L	F	D	E	A	N	N	M	V	A	D	A	R	K	E	K	Y	A	I	E	I	L	N	K	R	L	T	E	Q	L	R	E	K	D	T
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.																															T	T	T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions