 |
Job Description | P0ACK2 | Confidence | 93.23% | Date | Thu Jan 5 11:18:20 GMT 2012 |
Rank | 267 | Aligned Residues | 51 |
% Identity | 24% | Template | d1xmka1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Z-DNA binding domain
|
Resolution | 0.97 |
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | R | R | E | Q | I | I | Q | R | L | R | Q | Q | G | S | V | Q | V | N | D | L | S | A | L | Y | G | V | S | T | . |
V | T | I | R | N | D | L | A | F | L | E | K | Q | G | I | A | V | R | A | Y | G |
Query Conservation |   |
  |
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|   |
|
|
|
|   |
|   |
|
|   | . |   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|   |   |
|
|   |
|   |
|   |
|   |
|   |
|   |   |   |
Template Sequence |   |
A | E | I | K | E | K | I | C | D | Y | L | F | N | V | S | D | S | S | A | L | N | L | A | K | N | I | G | L | T | K | A | R | D | I | N | A | V | L | I | D | M | E | R | Q | G | D | V | Y | R | Q | G | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
297 | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|