Job Description P0ACK2 Confidence 74.79% Date Thu Jan 5 11:18:20 GMT 2012 Rank 488 Aligned Residues 82 % Identity 20% Template d1xmaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		I	I	Q	R	L	R	Q	Q	G	S	V	Q	V	N	D	L	S	A	L	Y	.	.	.	.	.	.	.	.	G	V	S	T	V	T	I	R	N	D	L	A	F	L	E	K	Q	G	I	A	V	R	A	Y	G	G	A	L	I	C	D	S	T	T	P	S	V	E	P	S	V	E	D	K	S	A	L	N	T	A	M	K
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence									.													.	.	.	.	.	.	.	.																													.
Template Conservation									.																																																	.
Template Sequence		I	L	S	L	L	I	E	.	G	D	S	Y	G	Y	E	I	S	K	N	I	R	I	K	T	D	E	L	Y	V	I	K	E	T	T	L	Y	S	A	F	A	R	L	E	K	N	G	Y	I	K	S	Y	Y	G	E	E	T	.	K	R	R	T	Y	Y	R	I	T	P	E	G	I	K	Y	Y	K	Q	K	C	E	E	W
Template Known Secondary structure									.																	T	T	S																		T	T	S										.
Template Predicted Secondary structure									.																																																	.
Template SS confidence
		15	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		94	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	V	A	K	A	A	V	E	L	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	T	K	K	V	I	N	K	F	V	K
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions