Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK2
Confidence99.09%DateThu Jan 5 11:18:20 GMT 2012
Rank15Aligned Residues59
% Identity27%Templated1j5ya1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Biotin repressor-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20...... ...30.........40.........50.........60 .........70...
Predicted Secondary structure  .








.




Query SS confidence 











.

































.












Query Sequence  TSERREQIIQRL. RQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGI. AVRAYGGALICDS
Query Conservation    

   

  
.   
 
 
 



 
 

  





  

  
 .
 
  


     
Alig confidence 











.

































.












Template Conservation 
 

   

  
      

  


  
 

 


 


  
   
  
     

 
  
Template Sequence  RQERLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYNIVATPRGYVLAGG
Template Known Secondary structure 
SS
B
TS
T


TT



Template Predicted Secondary structure 


















Template SS confidence 




























































   7..10.........20.........30.........40.........50.........60.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions