Job Description P0ACK2 Confidence 93.46% Date Thu Jan 5 11:18:20 GMT 2012 Rank 262 Aligned Residues 55 % Identity 16% Template d1aoya_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Arginine repressor (ArgR), N-terminal DNA-binding domain Resolution UNK

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.		.
Query SS confidence																																											.	.	.	.	.		.
Query Sequence		M	S	N	T	D	A	S	G	E	K	R	V	T	G	T	S	E	R	R	E	Q	I	I	Q	R	L	R	Q	Q	G	S	V	Q	V	N	D	L	S	A	L	Y	.	.	.	.	.	G	.	V	S	T	V	T	I	R	N	D	L	A	F	L	E	K	Q	G	I	A	V	R	A	Y	G	G
Query Conservation																																											.	.	.	.	.		.
Alig confidence						.	.	.	.	.	.	.	.																														.	.	.	.	.		.														.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																																																		.	.	.	.
Template Sequence		M	R	S	S	.	.	.	.	.	.	.	.	A	K	Q	E	E	L	V	K	A	F	K	A	L	L	K	E	E	K	F	S	S	Q	G	E	I	V	A	A	L	Q	E	Q	G	F	D	N	I	N	Q	S	K	V	S	R	M	L	T	K	F	.	.	.	.	G	A	V	R	T	R	N	A
Template Known Secondary structure						.	.	.	.	.	.	.	.			S	T	T											T					S												T		S	S														.	.	.	.	T							T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																																																		.	.	.	.
Template SS confidence
		1	.	.	.									.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions