Job Description P0ACK2 Confidence 96.99% Date Thu Jan 5 11:18:20 GMT 2012 Rank 106 Aligned Residues 100 % Identity 16% Template c3r4kD_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution Resolution 2.46 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		T	G	T	S	E	R	R	E	Q	I	I	Q	R	L	R	Q	.	Q	G	S	V	Q	V	N	D	L	S	A	L	Y	G	V	S	T	V	T	I	R	N	D	L	A	F	L	E	K	Q	G	I	A	V	R	A	Y	G	G	A	L	I	C	D	S	T	T	P	S	V	E	P	S	V	E	D	K	S	A	L	N	T	A
Query Conservation																		.
Alig confidence																		.																																								.
Template Conservation																																																										.
Template Sequence		X	G	T	V	S	K	A	L	T	L	L	T	Y	F	N	H	G	R	L	E	I	G	L	S	D	L	T	R	L	S	G	X	N	K	A	T	V	Y	R	L	X	S	E	L	Q	E	A	G	F	V	E	Q	V	E	R	S	.	Y	R	L	G	P	Q	V	L	R	L	A	A	L	R	E	A	S	V	P	I	L	S	A
Template Known Secondary structure													T	T		B	T	T	B	S													S															T	T	S								.					T	T												S
Template Predicted Secondary structure																																																										.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.									.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.
Query Sequence		M	K	R	S	V	A	K	A	A	V	E	L	.	.	.	.	.	.	.	.	I	Q	P	G	H	R	V	I	L	D
Query Conservation														.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	R	V	L	R	E	L	S	E	D	T	G	E	T	T	H	L	S	L	L	Q	G	E	Q	L	A	S	L	S
Template Known Secondary structure														S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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