Job Description P0ACK2 Confidence 97.84% Date Thu Jan 5 11:18:20 GMT 2012 Rank 37 Aligned Residues 162 % Identity 15% Template c3ecsD_ PDB info PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha Resolution 2.65 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																					.	.																			.	.	.	.	.	.	.
Query SS confidence																																					.	.																			.	.	.	.	.	.	.
Query Sequence		E	D	K	S	A	L	N	T	A	M	K	R	S	V	A	K	A	A	V	E	L	I	Q	P	G	H	R	V	I	L	D	S	G	T	T	.	.	T	F	E	I	A	R	L	M	R	K	H	T	D	V	I	A	M	T	.	.	.	.	.	.	.	N	G	M	N	V	A	N	A	L	L	E	A	E	G	V	E	L	L
Query Conservation																																					.	.																			.	.	.	.	.	.	.
Alig confidence																																					.	.																			.	.	.	.	.	.	.													.
Template Conservation																																																																												.
Template Sequence		E	L	F	L	R	R	I	S	L	S	R	N	K	I	A	D	L	C	H	T	F	I	K	D	G	A	T	I	L	T	H	A	Y	S	R	V	V	L	R	V	L	E	A	A	V	A	A	K	K	R	F	S	V	Y	V	T	E	S	Q	P	D	L	S	G	K	K	X	A	K	A	L	C	H	L	.	N	V	P	V	T
Template Known Secondary structure																					T	T			T	T							S															T	T											T	T	T	T											T	T	.	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		M	T	G	G	H	L	R	R	Q	S	Q	S	F	Y	G	D	Q	A	E	Q	S	L	Q	N	Y	H	F	D	M	L	F	L	G	V	D	A	I	D	L	E	R	G	V	S	T	H	N	E	D	E	A	R	L	N	R	R	M	C	E	V	A	E	R	I	I	V	V	T	D	S	S	K	F	N	R	S	S	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.													.	.																					.																															.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.													.	.																					.
Template Sequence		V	.	.	.	.	.	.	.	.	.	.	.	V	L	D	A	A	V	G	Y	I	X	E	K	.	.	A	D	L	V	I	V	G	A	E	G	V	V	E	N	G	G	I	I	N	K	.	I	G	T	N	Q	X	A	V	C	A	K	A	Q	N	K	P	F	Y	V	V	A	E	S	F	K	F	V	R	L	F	P	L	N
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.			G	G	G					G	G	G	.	.		S							S				T	T	S						.	T	T											T	T									G	G	G	B		S				S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.													.	.																					.
Template SS confidence
		177												.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
																								231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	K	I	I	D	T	Q	R	I	D	M	I	I	V	D	E	G	.	.	I	P	A	D	S	L	E	G	L	R	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		Q	Q	D	V	P	D	K	F	K	Y	K	A	D	G	Q	D	L	K	E	E	H	P	W	V	D	Y	T	A	P	S	L	I	T	L	L	F	T	D	L	G	V	L	T	P	S	A	V	S	D	E	L	I	K
Template Known Secondary structure		G	G	G	S						S	S					S							S						G	G	G		S					T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions