Job Description P0ACK2 Confidence 97.81% Date Thu Jan 5 11:18:20 GMT 2012 Rank 39 Aligned Residues 90 % Identity 19% Template c2du9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:predicted transcriptional regulators; PDBTitle: crystal structure of the transcriptional factor from c.glutamicum Resolution 2.28 Å

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		19	20	.	.	.	.	.	.	.	.	.										30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.				.
Query SS confidence													.	.	.	.	.	.	.	.	.				.
Query Sequence		R	E	Q	I	I	Q	R	L	R	Q	Q	.	.	.	.	.	.	.	.	.	G	S	V	.	Q	V	N	D	L	S	A	L	Y	G	V	S	T	V	T	I	R	N	D	L	A	F	L	E	K	Q	G	I	A	V	R	A	Y	G	G	A	L	I	C	D	S	T	T	P	S	V	E	P	S	V	E	D	K	S	A	L
Query Conservation													.	.	.	.	.	.	.	.	.				.
Alig confidence													.	.	.	.	.	.	.	.	.				.
Template Conservation
Template Sequence		Y	K	Q	I	A	S	L	I	E	D	S	I	V	D	G	T	L	S	I	D	Q	R	V	P	S	T	N	E	L	A	A	F	H	R	I	N	P	A	T	A	R	N	G	L	T	L	L	V	E	A	G	I	L	Y	K	K	R	G	I	G	X	F	V	S	A	Q	A	P	A	L	I	R	E	R	R	D	A	A	F	A
Template Known Secondary structure															S	S	S	S		T	T													S																	T	T	S					T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	A	M	K	R	S	V	A	K	A	A	V	E	L	I	Q	P	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	Y	V	A	P	L	I	D	E	S	I	H	L	G	F	T	R	A	R
Template Known Secondary structure					T										T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions