Job Description P0ACK2 Confidence 97.37% Date Thu Jan 5 11:18:20 GMT 2012 Rank 77 Aligned Residues 93 % Identity 18% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		19	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		R	E	Q	I	I	Q	R	L	R	Q	Q	G	.	.	S	V	Q	V	N	D	L	S	A	L	Y	G	V	S	T	V	T	I	R	N	D	L	A	F	L	E	K	Q	G	I	A	V	R	A	Y	G	G	A	L	I	C	D	S	T	T	P	S	V	E	P	S	V	E	D	K	S	A	L	N	T	A	M	K	R	S	V
Query Conservation														.	.
Alig confidence														.	.																														.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	R	I	L	E	E	L	E	A	Q	G	V	H	R	T	S	S	E	Q	L	G	G	L	A	Q	V	T	A	F	Q	V	R	K	D	L	S	Y	F	G	S	Y	G	.	.	T	R	G	V	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	P	V	L	K	R	E
Template Known Secondary structure												T	T														T	S												T	T				.	.		T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.																						.	.	.	.	.	.	.	70
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	A	V	E	L	I	Q	P	G	H	R	V	I	L	D	S	G	T	T	T	F	E	I	A	R	L	M	R	K	H	T	D	V	I	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	H	I	L	G	L	N	R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R
Template Known Secondary structure							T	T	T	S										S										S				S	S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions