|   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | M | K | R | S | V | A | K | A | A | V | E | . |
. |
. |
L | I | Q | P | G | H | R | V | I | L | D | S | G | T | T | T | F | E | I | A | R | L | M | R | K | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | D | V | I | A | M | T | N | G | M | N | V | A | N | A | L | L | E | A | E | G | V | E | L | L | M | T | G | G |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |
|
|   | . | . | . |   |
|   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
D | A | K | R | A | A | A | Y | R | A | V | D | E | N | L | K | F | D | D | H | K | I | I | G | I | G | S | G | S | T | V | V | Y | V | A | E | R | I | G | Q | Y | L | H | D | P | K | F | Y | E | V | A | S | K | F | I | C | I | P | T | G | F | Q | S | R | N | L | I | L | D | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | T |
|
|  |  |  |  |
|
|
| S | S | T |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T | T |  |  |  |  | T | T |
|  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
  |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | L | R | R | Q | S | Q | S | F | Y | G | D | Q | A | E | Q | S | L | Q | N | Y | H | F | D | M | L | F | L | G | V | D | A | I | D | L | E | R | G | V | S | T | H | N | E | D | E | A | R | L | N | R | R | M | C | E | V | A | E | R | I | I | V | V | T | D | S | S | K | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . |
|
|   |
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | L | Q | L | G | S | I | E | Q | Y | P | R | I | D | I | A | F | D | G | A | D | E | V | D | E | N | L | Q | L | I | K | G | G | G | A | C | L | F | Q | E | K | L | V | S | T | S | A | K | T | F | I | V | V | A | D | S | R | K | K |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | T |
|  |  |
|
| T | T | T |
|
| S |  |  |  |  |  |  |
|
| S |  |  |
| T | T | S |
|  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | G | G | G | B |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |