Job Description P0ACK2 Confidence 95.23% Date Thu Jan 5 11:18:20 GMT 2012 Rank 231 Aligned Residues 134 % Identity 20% Template c1o57A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:pur operon repressor; PDBTitle: crystal structure of the purine operon repressor of2 bacillus subtilis Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																			.	.																													.	.	.	.	.	.								.	.	.
Query SS confidence																			.	.																													.	.	.	.	.	.								.	.	.
Query Sequence		G	T	S	E	R	R	E	Q	I	I	Q	R	L	R	Q	Q	G	.	.	S	V	Q	V	N	D	L	S	A	L	Y	G	V	S	T	V	T	I	R	N	D	L	A	F	L	E	K	Q	.	.	.	.	.	.	G	I	A	V	R	A	Y	.	.	.	G	G	A	L	I	C	D	S	T	T	P	S	V	E	P	S	V
Query Conservation																			.	.																													.	.	.	.	.	.								.	.	.
Alig confidence																			.	.																													.	.	.	.	.	.								.	.	.
Template Conservation
Template Sequence		R	R	S	G	R	L	V	D	L	T	N	Y	L	L	T	H	P	H	E	L	I	P	L	T	F	F	S	E	R	Y	E	S	A	K	S	S	I	S	E	D	L	T	I	I	K	Q	T	F	E	Q	Q	G	I	G	T	L	L	T	V	P	G	A	A	G	G	V	K	Y	I	P	K	M	K	Q	A	E	A	E	E	F
Template Known Secondary structure																T	S	T	T			B									T	T																				T	T	S								S	T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		E	D	K	S	A	L	N	T	A	M	K	R	S	V	A	K	A	A	V	E	L	I	Q	P	G	H	R	V	I	L	D	S	.	.	.	.	.	.	.	.	G	T	T	T	F	E	I	A	R	L	M	R	K	H	T	D	.	.	.	V	I	A	M	T	N	G	M	N	V	A	N	A	L	L	E	A	E	G	V	E
Query Conservation																																		.	.	.	.	.	.	.	.																	.	.	.
Alig confidence																.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		V	Q	T	L	G	Q	S	L	A	N	P	E	R	I	.	.	.	.	.	.	.	.	L	P	G	G	Y	V	Y	L	T	D	I	L	G	K	P	S	V	L	S	K	V	G	K	L	F	A	S	V	F	A	E	R	E	I	D	V	V	M	T	V	A	T	K	G	I	P	L	A	Y	A	A	A	S	Y	L	N	V	P
Template Known Secondary structure										T		G	G	G		.	.	.	.	.	.	.	.		T	T	T					T	T	T	T	T																T	T	T	S			S						T	T	T	T												T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.									.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		152	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions