Job Description P27306 Confidence 99.87% Date Thu Jan 5 11:43:55 GMT 2012 Rank 114 Aligned Residues 251 % Identity 19% Template d1y0pa2 SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain Resolution 1.50

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	S	Y	D	Y	D	A	I	V	I	G	S	G	P	G	G	E	G	A	A	M	G	L	V	K	Q	G	A	R	V	A	V	I	E	R	Y	Q	N	V	G	G	G	C	T	H	W	G	T	I	P	S	K	A	L	R	H	A	V	S	R	I	I	E	F	N	Q	N	P	L	Y	S	D	H	S	R	L	L	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	H	D	T	V	D	V	V	V	V	G	S	G	G	A	G	F	S	A	A	I	S	A	T	D	S	G	A	K	V	I	L	I	E	K	E	P	V	I	G	G	N	A	K	L	A	A	G	G	M	N	A	A	W	T	D	Q	Q	K	A	K	K	I	T	D	S	P	E	L	M	F	E	D	T	M	K	G	G	Q
Template Known Secondary structure				S				S							S													T	T								S	S	S	S	S		T	T	G	G	G			S					S	S							T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	A	D	I	L	N	H	A	D	N	V	I	N	Q	Q	T	R	M	R	Q	G	F	Y	E	R	N	H	C	E	I	L	Q	G	N	A	R	F	V	D	E	H	T	L	A	L	D	C	P	D	G	S	V	E	T	L	T	A	E	K	F	V	I	A	C	G	S	R	P	Y	H	P	T	D	V	D	F	T	H	P
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	N	D	P	A	L	V	K	V	L	S	S	H	S	K	D	S	V	D	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T		S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	Y	D	S	D	S	I	L	S	M	H	H	E	P	R	H	V	L	I	Y	G	A	G	V	I	G	C	E	Y	A	S	I	F	R	G	M	D	V	K	V	D	L	I	N	T	R	D	R	L	L	A	F	L	D	Q	E	M	S	D	S	L	S	Y	H	F	W	N	S	G	V	V	I	R	H	N	E	E	Y	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	A	M	G	A	D	L	T	D	V	G	M	M	G	G	A	S	V	N	R	A	H	R	P	T	G	G	A	G	V	G	A	H	V	V	Q	V	L	Y	D	N	A	V	K	R	N	I	D	L	R	M	N	T	R	G	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T										T	T		S	S						S	T	T	T																		T	T					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270																			.	.	.	.	.	.	.	.	.	280								.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure									.	.	.	.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Query SS confidence									.	.	.	.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Query Sequence		K	I	E	G	C	D	D	.	.	.	.	G	V	I	M	H	L	K	S	G	K	K	.	.	L	K	A	D	C	L	L	Y	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	G	N	T	D	S	L	A	L	.	.	.	.	.	.	.	Q	N	I	G	L	E	T	D	S	R
Query Conservation									.	.	.	.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Alig confidence									.	.	.	.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	L	K	D	D	K	G	T	V	K	G	I	L	V	K	G	M	Y	K	G	Y	Y	W	V	K	A	D	A	V	I	L	A	T	G	G	F	A	K	N	N	E	R	V	A	K	L	D	P	S	L	K	G	F	I	S	T	N	Q	P	G	A	V	G	D	G	L	D	V	A	E	N	A	G	G	A	L	K	D	M
Template Known Secondary structure							T	T	S										T	T	T								S										T	T										G	G	G	T	T					S		T	T		S	S									T	T						T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		291	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.									.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure					.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		G	Q	L	.	.	.	.	K	V	N	S	M	Y	Q	T	A	Q	P	H	V	Y	A	V	G	D	V	I	G	Y	P	S	L	A	S	A	.	.	.	.	.	.	.	.	A	Y	D	Q	G	R	I	A	A	Q	A	L	V
Query Conservation					.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Y	I	D	T	K	A	E	V	M	N	A	K	K	Q	V	I	P	G	L	Y	G	A	G	E	V	T	G	G	V	H	G	A	N	R	L	G	G	N	A	I	S	D	I	I	T	F	G	R	L	A	G	E	E	A	A
Template Known Secondary structure		T				T	T						T	T	S										S	T	T			S	S	S	T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions